RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 EML4Q9HC35 981 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 INTS10Q9NVR2 710 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 POLR3BQ9NW08 1133 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 TAS2R13Q9NYV9 303 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CFAP97Q9P2B7 532 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LHX3Q9UBR4 397 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 FKBPLQ9UIM3 349 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CORO1CQ9ULV4 474 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 CLEC4EQ9ULY5 219 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ARHGAP26Q9UNA1 814 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SH3BP1Q9Y3L3 701 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 OR51B4Q9Y5P0 310 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TNRC18O15417 2968 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 NRG2O14511 850 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 AIM2O14862 343 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 GPR39O43194 453 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SMAD6O43541 496 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 OR1I1O60431 355 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TBX10O75333 385 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PSMG1O95456 288 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PRAMEF12O95522 483 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CXCL14O95715 111 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LATS1O95835 1130 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 C8AP07357 584 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 HOXB8P17481 243 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 CTPS1P17812 591 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PIK3R1P27986 724 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PPARGP37231 505 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 PFKFB4Q16877 469 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 EFCAB3Q8N7B9 438 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CCDC124Q96CT7 223 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 ALG14Q96F25 216 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 C11orf49Q9H6J7 331 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 LSM7Q9UK45 103 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 MED16Q9Y2X0 877 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 COL4A6Q14031 1691 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 MIA3Q5JRA6 1907 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 RGSL1A5PLK6 1076 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TRPC5OSA6NMA1 111 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 UBFD1O14562 309 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 SMIM24O75264 130 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 PDE5AO76074 875 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SORBS2O94875 1100 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 ALPIP09923 528 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CTSAP10619 480 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 THRAP10827 490 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 BMP1P13497 986 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ITGAXP20702 1163 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 GKP32189 559 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SUOXP51687 545 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 OR4D1Q15615 310 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TRMT5Q32P41 509 aaKnown RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 FBXO48Q5FWF7 155 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ZNF678Q5SXM1 525 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CLEC6AQ6EIG7 209 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 NET1Q7Z628 596 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TMEM199Q8N511 208 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 DCAF4L2Q8NA75 395 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 KLHL23Q8NBE8 558 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CEP70Q8NHQ1 597 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 C2orf49Q9BVC5 232 aaPredicted RBP7.55□□□□□ -1.2
IFT88-201ENST00000319980 GPR63Q9BZJ6 419 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 ZBP1Q9H171 429 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 GSTO2Q9H4Y5 243 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 SYTL2Q9HCH5 934 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 GALPQ9UBC7 116 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 TANC1Q9C0D5 1861 aa7.55□□□□□ -1.2
IFT88-201ENST00000319980 CDH23Q9H251 3354 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 VGLL3A8MV65 326 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 F8W8V4 182 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 UBXN8O00124 270 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 GFRA2O00451 464 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 PPP6CO00743 305 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 EFCAB14O75071 495 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SNUPNO95149 360 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 GFAPP14136 432 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ARSAP15289 507 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 GJA8P48165 433 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 NUDT2P50583 147 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ACTR3P61158 418 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 HERVK_113P63132 956 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 BTKQ06187 659 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 SETMARQ53H47 684 aaPredicted RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 ARMC12Q5T9G4 340 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 RETSATQ6NUM9 610 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TAS2R42Q7RTR8 314 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 PTGR2Q8N8N7 351 aaPredicted RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 MICAL1Q8TDZ2 1067 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 EID2BQ96D98 161 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 RPL10LQ96L21 214 aaKnown RBP7.54□□□□□ -1.2
IFT88-201ENST00000319980 BIRC8Q96P09 236 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 TCF12Q99081 682 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 GPR21Q99679 349 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 CCDC28BQ9BUN5 200 aa7.54□□□□□ -1.2
IFT88-201ENST00000319980 ERVK-6Q9BXR3 956 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms