RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PRKCIP41743 596 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 CTBSQ01459 385 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 DPTQ07507 201 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 PEX6Q13608 980 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 DPYSL2Q16555 572 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 AMZ1Q400G9 498 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 ATG14Q6ZNE5 492 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 HSD11B1LQ7Z5J1 315 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 TECPR1Q7Z6L1 1165 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 OR4D9Q8NGE8 314 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
RPP40-201ENST00000319533 NKD1Q969G9 470 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 TAAR9Q96RI9 348 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 DPYSL5Q9BPU6 564 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 SLC12A9Q9BXP2 914 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 CDH19Q9H159 772 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 RBSNQ9H1K0 784 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 NOD2Q9HC29 1040 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 GEMIN8Q9NWZ8 242 aaKnown RBP14.19□□□□□ -0.14
RPP40-201ENST00000319533 IFNKQ9P0W0 207 aa14.19□□□□□ -0.14
RPP40-201ENST00000319533 PTPN13Q12923 2485 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 NPIPB15A6NHN6 443 aaPredicted RBP14.18□□□□□ -0.14
RPP40-201ENST00000319533 TMCO5BA8MYB1 307 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 AGRPO00253 132 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 PPM1DO15297 605 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 ADCY8P40145 1251 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 GNPDA1P46926 289 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 TRAF2Q12933 501 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 ZNF235Q14590 738 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 Q6ZVL8 140 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 POLNQ7Z5Q5 900 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 NLRP8Q86W28 1048 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 RCBTB1Q8NDN9 531 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 PIH1D2Q8WWB5 315 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 PATE1Q8WXA2 126 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 CCDC74BQ96LY2 380 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 DDA1Q9BW61 102 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 ADNPQ9H2P0 1102 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 ZWILCHQ9H900 591 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 ETNK2Q9NVF9 386 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 PDP2Q9P2J9 529 aa14.18□□□□□ -0.14
RPP40-201ENST00000319533 BZW2Q9Y6E2 419 aaKnown RBP14.18□□□□□ -0.14
RPP40-201ENST00000319533 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 H3BRJ5 948 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 PGLSO95336 258 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 SOD1P00441 154 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 FTLP02792 175 aaPredicted RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 THRAP10827 490 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 IL1R2P27930 398 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 PBX1P40424 430 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 POLD2P49005 469 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 CYP4F2P78329 520 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 ZBED6P86452 979 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 BOLA3Q53S33 107 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 TDRD12Q587J7 1177 aaKnown RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 SLC30A9Q6PML9 568 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 ADAMTSL4Q6UY14 1074 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 ZNF571Q7Z3V5 609 aaPredicted RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 TSPAN33Q86UF1 283 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 AGBL5Q8NDL9 886 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 PDCD6IPQ8WUM4 868 aaKnown RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 SLC25A18Q9H1K4 315 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 CNOT8Q9UFF9 292 aaKnown RBP14.17□□□□□ -0.14
RPP40-201ENST00000319533 SCINQ9Y6U3 715 aa14.17□□□□□ -0.14
RPP40-201ENST00000319533 B4E171 279 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 DDX3XO00571 662 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPP40-201ENST00000319533 FZD6O60353 706 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 SKILP12757 684 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 AMPD1P23109 780 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 CSF2RBP32927 897 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TSPAN7P41732 249 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 FASLGP48023 281 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 ATP1A2P50993 1020 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 CDH6P55285 790 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 GPLD1P80108 840 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 NFKB2Q00653 900 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 E4F1Q66K89 784 aaPredicted RBP14.16□□□□□ -0.14
RPP40-201ENST00000319533 DENND2CQ68D51 928 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 RAET1GQ6H3X3 334 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TMEM71Q6P5X7 295 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TMCO3Q6UWJ1 677 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 USP45Q70EL2 814 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 ZNF765Q7L2R6 523 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 BBS5Q8N3I7 341 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TEX26Q8N6G2 289 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 CPLX3Q8WVH0 158 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TRIM11Q96F44 468 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 CSPG4P5Q96PW8 444 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 SPRY4Q9C004 299 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 TRIM4Q9C037 500 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 XPO4Q9C0E2 1151 aaKnown RBP14.16□□□□□ -0.14
RPP40-201ENST00000319533 ABCG8Q9H221 673 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 CAPN11Q9UMQ6 739 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms