RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RAP2CQ9Y3L5 183 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 SESN1Q9Y6P5 492 aa4.15□□□□□ -1.74
SMCO3-201ENST00000316048 EBAG9O00559 213 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 KLK8O60259 260 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 TPPPO94811 219 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 CLDN7O95471 211 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 SHMT1P34896 483 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HSD17B4P51659 736 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 MFAP4P55083 255 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 RABEP1Q15276 862 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HIST2H2ACQ16777 129 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 CRIP3Q6Q6R5 217 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 GLDNQ6ZMI3 551 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 KIF6Q6ZMV9 814 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 FAM83HQ6ZRV2 1179 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 PRPF39Q86UA1 669 aaKnown RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HAPLN4Q86UW8 402 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 AACSQ86V21 672 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 KBTBD6Q86V97 674 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 LDLRAD3Q86YD5 345 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HORMAD2Q8N7B1 307 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HJURPQ8NCD3 748 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 PIGBQ92521 554 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 PLK3Q9H4B4 646 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 MVB12BQ9H7P6 319 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 LTB4R2Q9NPC1 389 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 SPAG4Q9NPE6 437 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 ECHDC1Q9NTX5 307 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 CWC25Q9NXE8 425 aaPredicted RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 MRPL15Q9P015 296 aaKnown RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 MAFFQ9ULX9 164 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 CARD8Q9Y2G2 431 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 AAR2Q9Y312 384 aaKnown RBP4.15□□□□□ -1.75
SMCO3-201ENST00000316048 HS3ST3A1Q9Y663 406 aa4.15□□□□□ -1.75
SMCO3-201ENST00000316048 LTBP4Q8N2S1 1624 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 COL22A1Q8NFW1 1626 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 A0A087X1B8 175 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 A0A0U1RQF3 1178 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 FAM237AA0A1B0GTK4 181 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 A0A1W2PPC1 479 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 H3BQ06 376 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 MT-CYBP00156 380 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 IRF1P10914 325 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PTPN2P17706 415 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 CHMLP26374 656 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PRAMEP78395 509 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 CFHR1Q03591 330 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PCLAFQ15004 111 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 MIDNQ504T8 468 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 ESCO2Q56NI9 601 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 ALG10Q5BKT4 473 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 ALG10BQ5I7T1 473 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 EARS2Q5JPH6 523 aaKnown RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PRAMEF19Q5SWL8 479 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 ASPHD1Q5U4P2 390 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 TMEM198Q66K66 360 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 GPR139Q6DWJ6 353 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 JADE1Q6IE81 842 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 SARM1Q6SZW1 724 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 GPSM1Q86YR5 675 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 ARHGEF26Q96DR7 871 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PPP1R13BQ96KQ4 1090 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 BAG1Q99933 345 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 CCDC177Q9NQR7 707 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 WSB2Q9NYS7 404 aaPredicted RBP4.14□□□□□ -1.75
SMCO3-201ENST00000316048 A3GALT2U3KPV4 340 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 PASKQ96RG2 1323 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 C5P01031 1676 aa4.14□□□□□ -1.75
SMCO3-201ENST00000316048 A0A1W2PRG0 241 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 TYW5A2RUC4 315 aaKnown RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 DPPA5A6NC42 116 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 MANSC4A6NHS7 340 aaPredicted RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 TTC36A6NLP5 189 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 A6NNC1 897 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 MASP2O00187 686 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 HIP1O00291 1037 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 TOP3BO95985 862 aaKnown RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 APOA4P06727 396 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 PIK3CAP42336 1068 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 CENPAP49450 140 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 CAMPP49913 170 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 SLC12A2P55011 1212 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 SOX10P56693 466 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 TUBA4AP68366 448 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 UBXN2AP68543 259 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 IKQ13123 557 aaPredicted RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 OLIG2Q13516 323 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 DRAP1Q14919 205 aaPredicted RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 RABL6Q3YEC7 729 aaPredicted RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 CDONQ4KMG0 1287 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 HSP90AB3PQ58FF7 597 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 GARNL3Q5VVW2 1013 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 FCRLBQ6BAA4 426 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 SUMO4Q6EEV6 95 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 TMEM71Q6P5X7 295 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 CPLX2Q6PUV4 134 aaKnown RBP4.13□□□□□ -1.75
SMCO3-201ENST00000316048 PCSK4Q6UW60 755 aa4.13□□□□□ -1.75
SMCO3-201ENST00000316048 ZNF813Q6ZN06 617 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms