RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 CDK18Q07002 472 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 TCEA2Q15560 299 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 P2RY11Q96G91 374 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 CIDEBQ9UHD4 219 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 NRXN1Q9ULB1 1477 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 AIREO43918 545 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 IL1R1P14778 569 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 AP1S2P56377 157 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 SPACA7Q96KW9 195 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 KCNU1A8MYU2 1149 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 IFNA6P05013 189 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 IFNA16P05015 189 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 PIRTP0C851 137 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 HNF4AP41235 474 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 NOMO1Q15155 1222 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 PTGES3Q15185 160 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 CCNYL2Q5T2Q4 361 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 AHSA2Q719I0 299 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 SATL1Q86VE3 508 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 RAB15P59190 212 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 ALG11Q2TAA5 492 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 CPTPQ5TA50 214 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 RAD51AP1Q96B01 352 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 MAT2BQ9NZL9 334 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 SLC30A4O14863 429 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 TP73O15350 636 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 MATKP42679 507 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 SLC5A3P53794 718 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 WNT3AP56704 352 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 FNDC3BQ53EP0 1204 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 GAD1Q99259 594 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 THG1LQ9NWX6 298 aaKnown RBP13.66□□□□□ -0.22
CLCN6-201ENST00000312413 MAP10Q9P2G4 905 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
CLCN6-201ENST00000312413 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 FAM149AA5PLN7 773 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 GNPDA1P46926 289 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 RTP1P59025 263 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TUBA4AP68366 448 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 MFSD10Q14728 455 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 RALGPS2Q86X27 583 aaPredicted RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 PPP1R16AQ96I34 528 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 OR10H2O60403 315 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 SLC25A12O75746 678 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TPSB2P20231 275 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 AZGP1P25311 298 aaKnown RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 MAXP61244 160 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 LIPEQ05469 1076 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TPSAB1Q15661 275 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 ZNF248Q8NDW4 579 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TOP1MTQ969P6 601 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TSSK3Q96PN8 268 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 TBC1D24Q9ULP9 559 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 ATP6V1G1O75348 118 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 DPEP1P16444 411 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 NR4A1P22736 598 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 FAM83AQ86UY5 434 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 RBFAQ8N0V3 343 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 GALNT15Q8N3T1 639 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 ARRDC4Q8NCT1 418 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 PIK3R3Q92569 461 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 LENG8Q96PV6 779 aaPredicted RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 BHLHE41Q9C0J9 482 aaPredicted RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 FABP3P05413 133 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 ACADLP28330 430 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 AQP1P29972 269 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 CADM1Q9BY67 442 aaKnown RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 MRPL9Q9BYD2 267 aaKnown RBP13.65□□□□□ -0.22
CLCN6-201ENST00000312413 STARD7Q9NQZ5 370 aa13.65□□□□□ -0.22
CLCN6-201ENST00000312413 CDH5P33151 784 aaPredicted RBP13.65□□□□□ -0.23
CLCN6-201ENST00000312413 KIR3DL1P43629 444 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 TPTEP56180 551 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 MYBPC3Q14896 1274 aa13.65□□□□□ -0.23
CLCN6-201ENST00000312413 KCTD19Q17RG1 926 aaPredicted RBP13.65□□□□□ -0.23
CLCN6-201ENST00000312413 VPS26BQ4G0F5 336 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms