RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NPHS1O60500 1241 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 RHOBTB1O94844 696 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 CCR10P46092 362 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 ERVK-21P61565 698 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 PDAP1Q13442 181 aaKnown RBP21.2■□□□□ 0.98
ATG4D-201ENST00000309469 C22orf39Q6P5X5 142 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 ELMSAN1Q6PJG2 1045 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 PARP9Q8IXQ6 854 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 CCNYL1Q8N7R7 359 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 HTATIP2Q9BUP3 242 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 COG4Q9H9E3 785 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 PIDD1Q9HB75 910 aa21.2■□□□□ 0.98
ATG4D-201ENST00000309469 NEMP2A6NFY4 417 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 MGRN1O60291 552 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 BMP1P13497 986 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 CD1DP15813 335 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ZNF37AP17032 561 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-201ENST00000309469 MPSTP25325 297 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 HNF1BP35680 557 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ALDH18A1P54886 795 aaKnown RBP21.19■□□□□ 0.98
ATG4D-201ENST00000309469 SULT2A1Q06520 285 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 PRKAA1Q13131 559 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 DMC1Q14565 340 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 PTPRNQ16849 979 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 AARS2Q5JTZ9 985 aaKnown RBP21.19■□□□□ 0.98
ATG4D-201ENST00000309469 VWA5B1Q5TIE3 1220 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 TRIM67Q6ZTA4 783 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ADGRD2Q7Z7M1 963 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 LSMEM2Q8N112 164 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ITFG1Q8TB96 612 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 VOPP1Q96AW1 172 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 CEP44Q9C0F1 390 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ALG9Q9H6U8 611 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ZFYVE1Q9HBF4 777 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 TAS2R13Q9NYV9 303 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 NCKIPSDQ9NZQ3 722 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 MED16Q9Y2X0 877 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 DOCK6Q96HP0 2047 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 A8MT66 165 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 CAPN14A8MX76 684 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 KRT16P08779 473 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 RPL14P50914 215 aaKnown RBP21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ECT2LQ008S8 904 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ACCSLQ4AC99 568 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 CFAP157Q5JU67 520 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 EPGNQ6UW88 154 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 PIWIL4Q7Z3Z4 852 aaKnown RBP21.19■□□□□ 0.98
ATG4D-201ENST00000309469 BIRC8Q96P09 236 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 TUBGCP5Q96RT8 1024 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 SYTL2Q9HCH5 934 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 MARK1Q9P0L2 795 aa21.19■□□□□ 0.98
ATG4D-201ENST00000309469 ANKRD36A6QL64 1941 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 ZBTB14O43829 449 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 DIAPH2O60879 1101 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 IPO13O94829 963 aaKnown RBP21.18■□□□□ 0.98
ATG4D-201ENST00000309469 KCNA5P22460 613 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 PTPN4P29074 926 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SERPINB5P36952 375 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 KCNC1P48547 511 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 HK2P52789 917 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CACNG1Q06432 222 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CDKN3Q16667 212 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SETMARQ53H47 684 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CARD16Q5EG05 197 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 TAS2R42Q7RTR8 314 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 ADIPOR2Q86V24 386 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 ZSWIM9Q86XI8 627 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 PCDH20Q8N6Y1 951 aaKnown RBP21.18■□□□□ 0.98
ATG4D-201ENST00000309469 AGR3Q8TD06 166 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SMG7Q92540 1137 aaKnown RBP21.18■□□□□ 0.98
ATG4D-201ENST00000309469 PTERQ96BW5 349 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 FAM136AQ96C01 138 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CNDP1Q96KN2 507 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 C19orf43Q9BQ61 176 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CCDC106Q9BWC9 280 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 CYP4F12Q9HCS2 524 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SLCO3A1Q9UIG8 710 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SORCS3Q9UPU3 1222 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 FAM50BQ9Y247 325 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 SLC30A1Q9Y6M5 507 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 NOTCH4Q99466 2003 aa21.18■□□□□ 0.98
ATG4D-201ENST00000309469 C1orf232A0A0U1RR37 186 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 CAPN8A6NHC0 703 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 F8W8V4 182 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 SLC9A3R1O14745 358 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 BNIP3LO60238 219 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 OR1I1O60431 355 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 PKMP14618 531 aaKnown RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 CALB2P22676 271 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 SLC22A9Q8IVM8 553 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 C12orf76Q8N812 135 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 RAB3IPQ96QF0 476 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 CPEB1Q9BZB8 566 aaKnown RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 ZDHHC2Q9UIJ5 367 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 MATN2O00339 956 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 SNUPNO95149 360 aaKnown RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 ESRRAP11474 423 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-201ENST00000309469 PTGER3P43115 390 aa21.17■□□□□ 0.98
ATG4D-201ENST00000309469 PAQR3Q6TCH7 311 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms