RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ABCG8Q9H221 673 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 MRM3Q9HC36 420 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 FZD3Q9NPG1 666 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 GDF3Q9NR23 364 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 PHPT1Q9NRX4 125 aaPredicted RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 GPR27Q9NS67 375 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 SAMD15Q9P1V8 674 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 THADAQ6YHU6 1953 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 GPR179Q6PRD1 2367 aa17.83■□□□□ 0.45
SSSCA1-201ENST00000309328 TRPM6Q9BX84 2022 aa17.83■□□□□ 0.45
SSSCA1-201ENST00000309328 MROH6A6NGR9 719 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 SDR42E2A6NKP2 422 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 RAD51BO15315 384 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 LDB2O43679 373 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 SLC4A1P02730 911 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 PCCBP05166 539 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 THEGLP0DJG4 465 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 BPIP17213 487 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 PSMA3P25788 255 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 GPR1P46091 355 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 ZNF140P52738 457 aaPredicted RBP17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 THOP1P52888 689 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 KIAA1024LP59773 190 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 SEPT6Q14141 434 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 INPP5AQ14642 412 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 Q6ZSR6 202 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 PDIK1LQ8N165 341 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 EID2BQ96D98 161 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 BMFQ96LC9 184 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 SMIM14Q96QK8 99 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 TRIM51Q9BSJ1 452 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 NAT9Q9BTE0 207 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 SEMA4GQ9NTN9 838 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 ANKRD6Q9Y2G4 727 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 TCAF1Q9Y4C2 921 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 ARL5AQ9Y689 179 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 DMDP11532 3685 aa17.83■□□□□ 0.44
SSSCA1-201ENST00000309328 GPR89AB7ZAQ6 455 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 H7C0S8 307 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 ARHGAP33O14559 1287 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 AURKAO14965 403 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 TMEM63AO94886 807 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 CER1O95813 267 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 GPR89BP0CG08 455 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 MYCLP1P12525 358 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 MAGEA3P43357 314 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 CSNK1EP49674 416 aaKnown RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 ATXN3P54252 364 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 SESN2P58004 480 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 NXPH1P58417 271 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 NFATC4Q14934 902 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 PTPRRQ15256 657 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 ANKRD22Q5VYY1 191 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 DUPD1Q68J44 220 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 HIBCHQ6NVY1 386 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 MACC1Q6ZN28 852 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 ZNF534Q76KX8 674 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 CCNJLQ8IV13 435 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 OR4K2Q8NGD2 314 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 LRRC39Q96DD0 335 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 VPS35Q96QK1 796 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 MYOCQ99972 504 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 APOOQ9BUR5 198 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 RIOK2Q9BVS4 552 aaKnown RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 TEX101Q9BY14 249 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 PHACTR1Q9C0D0 580 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 MBNL1Q9NR56 388 aaKnown RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 NLE1Q9NVX2 485 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 ANAPC5Q9UJX4 755 aa17.82■□□□□ 0.44
SSSCA1-201ENST00000309328 GLYATL1P3A0A0U1RQE8 302 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 SPTY2D1-AS1A0A0U1RR47 76 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 TCRBV7S3A2A0A539 114 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 POM121BA6NF01 834 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 TNFRSF10CO14798 259 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 TPH1P17752 444 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 PAMP19021 973 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 GRIA1P42261 906 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CTSKP43235 329 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 ARRB1P49407 418 aaPredicted RBP17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 BLKP51451 505 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 ARL4CP56559 192 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CLDN2P57739 230 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CERCAMQ5T4B2 595 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CEP128Q6ZU80 1094 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CAND1Q86VP6 1230 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 PARGQ86W56 976 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 GPR26Q8NDV2 337 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 SCAMP4Q969E2 229 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 ULK4Q96C45 1275 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 HIC2Q96JB3 615 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 KIFC1Q9BW19 673 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 SPATA16Q9BXB7 569 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 FOXP3Q9BZS1 431 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 SMOXQ9NWM0 555 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 CD84Q9UIB8 345 aa17.81■□□□□ 0.44
SSSCA1-201ENST00000309328 FRYLO94915 3013 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 A0A1B0GVT2 93 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 ITGALP20701 1170 aa17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 RPL21P46778 160 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-201ENST00000309328 ITGA8P53708 1063 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms