RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FBRSL1Q9HCM7 1045 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SAYSD1Q9NPB0 183 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GTSE1Q9NYZ3 720 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ANKFY1Q9P2R3 1169 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TUBGCP4Q9UGJ1 667 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 STRIP2Q9ULQ0 834 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 WASF3Q9UPY6 502 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF148Q9UQR1 794 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CHKBQ9Y259 395 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TNFSF13BQ9Y275 285 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 R3HDM2Q9Y2K5 976 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MRPS17Q9Y2R5 130 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 YIPF1Q9Y548 306 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TIMM13Q9Y5L4 95 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SHROOM3Q8TF72 1996 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NUMA1Q14980 2115 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 URB1O60287 2271 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PCDH15Q96QU1 1955 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 hCG_1818297A0A087WSY0 165 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TCRBV5S1A1TA0A578 114 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 SPECC1L-ADORA2AF8WAN1 911 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 M0QZQ0 153 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF197O14709 1029 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 HNRNPDLO14979 420 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 SYN3O14994 580 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CHADO15335 359 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 FAM189A1O60320 539 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CCDC22O60826 627 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PEX11AO75192 247 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 KRT7P08729 469 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 GSTA2P09210 222 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF806P0C7X5 589 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TPBGLP0DKB5 382 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 T-ENOLP0DO92 83 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PECAM1P16284 738 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 KRT15P19012 456 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ATP6V1C1P21283 382 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CA4P22748 312 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ARSEP51690 589 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 LIMK1P53667 647 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 MLLT6P55198 1093 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TAS2R40P59535 323 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 YWHAEP62258 255 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 SHC2P98077 582 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 OCRLQ01968 901 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 DPTQ07507 201 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ABHD18Q0P651 414 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZBTB6Q15916 424 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TAZQ16635 292 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CTXN3Q4LDR2 81 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TPGS2Q68CL5 300 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CAPRIN2Q6IMN6 1127 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 C4orf22Q6V702 233 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 BBS12Q6ZW61 710 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PDZD4Q76G19 769 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CEP68Q76N32 757 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM150AQ86TG1 271 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 WDR5BQ86VZ2 330 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 LONP2Q86WA8 852 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ERICH1Q86X53 443 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 MIB1Q86YT6 1006 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ARID3BQ8IVW6 561 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ARHGAP24Q8N264 748 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ATAD1Q8NBU5 361 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 RBBP8NLQ8NC74 664 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM35BQ8NCS4 154 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZSWIM2Q8NEG5 633 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 DEPTORQ8TB45 409 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 RAB3IL1Q8TBN0 382 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 DEPDC1BQ8WUY9 529 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF75CPQ92670 426 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 SLC7A6OSQ96CW6 309 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ERP27Q96DN0 273 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 THOC1Q96FV9 657 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 C9orf72Q96LT7 481 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF570Q96NI8 536 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PGLYRP2Q96PD5 576 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CYTH2Q99418 400 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 ADPGKQ9BRR6 497 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 CCDC28BQ9BUN5 200 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 TBC1D10AQ9BXI6 508 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 MYLK2Q9H1R3 596 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 FAM124BQ9H5Z6 455 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PNPLA8Q9NP80 782 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 HPS4Q9NQG7 708 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 MKS1Q9NXB0 559 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 WDR35Q9P2L0 1181 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 AGO2Q9UKV8 859 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 RAB23Q9ULC3 237 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 COA3Q9Y2R0 106 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 MTO1Q9Y2Z2 717 aaKnown RBP4.97□□□□□ -1.61
CKS1B-201ENST00000308987 L3MBTL1Q9Y468 752 aa4.97□□□□□ -1.61
CKS1B-201ENST00000308987 PCDHB4Q9Y5E5 795 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms