RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 SEMA5AQ13591 1074 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SEPT6Q14141 434 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPARCL1Q14515 664 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CDKN3Q16667 212 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CYP1B1Q16678 543 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PRAMEF14Q5SWL7 426 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ZDHHC20Q5W0Z9 365 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KCTD11Q693B1 232 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RANBP10Q6VN20 620 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SYT10Q6XYQ8 523 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KDM7AQ6ZMT4 941 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TMC3Q7Z5M5 1100 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PRUNE1Q86TP1 453 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 NAXDQ8IW45 347 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KLHDC8BQ8IXV7 354 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SETD7Q8WTS6 366 aaKnown RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 C16orf45Q96MC5 204 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RUNDC3BQ96NL0 473 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ZSCAN5AQ9BUG6 496 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RIOK2Q9BVS4 552 aaKnown RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPATA16Q9BXB7 569 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FAM83DQ9H4H8 585 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RNF14Q9UBS8 474 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 APOBEC3BQ9UH17 382 aaKnown RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 MOSPD1Q9UJG1 213 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PCDHGB2Q9Y5G2 931 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPO11Q9Y5K1 396 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KNL1Q8NG31 2342 aa10.96□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CABIN1Q9Y6J0 2220 aa10.96□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 K7ESM1 405 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 STX7O15400 261 aaKnown RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PCDHGA12O60330 932 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SDC3O75056 442 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PPFIA2O75334 1257 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PIAS2O75928 621 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 RASGRP1O95267 797 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ECEL1O95672 775 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 KRT14P02533 472 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CSF2P04141 144 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 HOXC4P09017 264 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ZSCAN5DPP0CG00 497 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ALPPL2P10696 532 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CTSEP14091 401 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 LPOP22079 712 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 RPL22P35268 128 aaKnown RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 HMGCLP35914 325 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TRIM23P36406 574 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SPAM1P38567 509 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 GRK6P43250 576 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CDK3Q00526 305 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CDH17Q12864 832 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 FZD2Q14332 565 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PPP1R7Q15435 360 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TAF1AQ15573 450 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ZNF542PQ5EBM4 170 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 HENMT1Q5T8I9 393 aaKnown RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PDPK2PQ6A1A2 396 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ADAMTSL4Q6UY14 1074 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 NLRP8Q86W28 1048 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PHACTR4Q8IZ21 702 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CBARPQ8N350 705 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 GLIS1Q8NBF1 620 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 OR56A4Q8NGH8 313 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SCAMP4Q969E2 229 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 FUBP1Q96AE4 644 aaKnown RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 PLEKHG4BQ96PX9 1271 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ARNT2Q9HBZ2 717 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 BPIFA1Q9NP55 256 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 EIF2B3Q9NR50 452 aaKnown RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 NFKBIL1Q9UBC1 381 aaPredicted RBP10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SPASTQ9UBP0 616 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 GVINP1Q7Z2Y8 2422 aa10.95□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 NEMP2A6NFY4 417 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 CCDC188H7C350 402 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 KIF2AO00139 706 aaPredicted RBP10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 AP3B1O00203 1094 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 AURKAO14965 403 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 INPP4BO15327 924 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ASMTLO95671 621 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TNFP01375 233 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 NME1P15531 152 aaKnown RBP10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 BPIP17213 487 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 HADHAP40939 763 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TERF1P54274 439 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SRP54P61011 504 aaKnown RBP10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 SARNPP82979 210 aaKnown RBP10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 GPS1Q13098 491 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 EIF2B5Q13144 721 aaKnown RBP10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 LAMB3Q13751 1172 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 ITGA9Q13797 1035 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TPRG1LQ5T0D9 272 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 DOK6Q6PKX4 331 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 RFLNAQ6ZTI6 216 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
CSPG4P2Y-201ENST00000306853 GATAD2AQ86YP4 633 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms