RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TEKT5Q96M29 485 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 CCDC3Q9BQI4 270 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 GLOD4Q9HC38 313 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 TRNAU1APQ9NX07 287 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 PKD2L2Q9NZM6 624 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 SLC17A4Q9Y2C5 497 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 RAXQ9Y2V3 346 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 REXO2Q9Y3B8 237 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 RGSL1A5PLK6 1076 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 IVLP07476 585 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 PTPN3P26045 913 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 VAV2P52735 878 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 ADCY2Q08462 1091 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 ILF3Q12906 894 aaKnown RBP eCLIP26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 GALNT3Q14435 633 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 RBM44Q6ZP01 1051 aaKnown RBP26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 TXLNBQ8N3L3 684 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 KIAA1524Q8TCG1 905 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 GPBAR1Q8TDU6 330 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 TADA1Q96BN2 335 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 GRAMD1AQ96CP6 724 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 HIC2Q96JB3 615 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 TRIB3Q96RU7 358 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 RIOK2Q9BVS4 552 aaKnown RBP26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 GSDMCQ9BYG8 508 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 DPEP2Q9H4A9 486 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 SUFUQ9UMX1 484 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 PCDHA3Q9Y5H8 950 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 DUSP10Q9Y6W6 482 aa26.33■■□□□ 1.81
CDKN2A-201ENST00000304494 HACD1B0YJ81 288 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 GNPDA1P46926 289 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 SPINT3P49223 89 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 CDK18Q07002 472 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 PEX6Q13608 980 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 PCSK7Q16549 785 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 CCDC70Q6NSX1 233 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 OGFOD3Q6PK18 319 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 BBS12Q6ZW61 710 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 KDELC2Q7Z4H8 507 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 KIAA1328Q86T90 577 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 ZC3H18Q86VM9 953 aaKnown RBP26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 ACRBPQ8NEB7 543 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 GPR156Q8NFN8 814 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 VAT1Q99536 393 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 PCDHB1Q9Y5F3 818 aa26.32■■□□□ 1.8
CDKN2A-201ENST00000304494 MYLKQ15746 1914 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 CCDC66A2RUB6 948 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 PJA2O43164 708 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 ISXQ2M1V0 245 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 SPATA22Q8NHS9 363 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 CCL4L1Q8NHW4 92 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 CCDC74AQ96AQ1 378 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 SRPK1Q96SB4 655 aaKnown RBP26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 LACRTQ9GZZ8 138 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 CDH19Q9H159 772 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 FAM83DQ9H4H8 585 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 SUDS3Q9H7L9 328 aaPredicted RBP26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 ZFYVE1Q9HBF4 777 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 MAGEE1Q9HCI5 957 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 EFR3BQ9Y2G0 817 aa26.31■■□□□ 1.8
CDKN2A-201ENST00000304494 B4DGG1 531 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 APOC4-APOC2K7ER74 178 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 USP12O75317 370 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 MT-CYBP00156 380 aaPredicted RBP26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 APOC2P02655 101 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 FUCA1P04066 466 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 POLD2P49005 469 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 WASHC5Q12768 1159 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 SPIDRQ14159 915 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 DOK6Q6PKX4 331 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 LYSMD3Q7Z3D4 306 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 HAUS1Q96CS2 278 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 SCARF2Q96GP6 870 aaPredicted RBP26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 QKIQ96PU8 341 aaKnown RBP eCLIP26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 AGAP2Q99490 1192 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 HEMGNQ9BXL5 484 aa26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 KLHL8Q9P2G9 620 aaPredicted RBP26.3■■□□□ 1.8
CDKN2A-201ENST00000304494 GOLGA6L6A8MZA4 724 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 NDST3O95803 873 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 GLB1P16278 677 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 CTNNA2P26232 953 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 CETN2P41208 172 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 TNNT3P45378 269 aaPredicted RBP26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 RWDD2BP57060 319 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 XRCC4Q13426 336 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 C14orf28Q4W4Y0 310 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 FAM182AQ5T1J6 154 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 HENMT1Q5T8I9 393 aaKnown RBP26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 CCDC181Q5TID7 509 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 TMEM139Q8IV31 216 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 HTR3CQ8WXA8 447 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 COX14Q96I36 57 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 SYNDIG1Q9H7V2 258 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 RAD18Q9NS91 495 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 FAM153AQ9UHL3 310 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 LAMA5O15230 3695 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 CFAP47Q6ZTR5 3102 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 KNTC1P50748 2209 aa26.29■■□□□ 1.8
CDKN2A-201ENST00000304494 INPP4BO15327 924 aa26.28■■□□□ 1.8
CDKN2A-201ENST00000304494 NOBOXO60393 691 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms