RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NOL9Q5SY16 702 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 FAM183BPQ6ZVS7 135 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 DCP2Q8IU60 420 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 CEP97Q8IW35 865 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 C8orf59Q8N0T1 100 aaPredicted RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 GLB1L3Q8NCI6 653 aaPredicted RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 UBASH3BQ8TF42 649 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 DACT3Q96B18 629 aaPredicted RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 KCNA7Q96RP8 456 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 NODALQ96S42 347 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 HBEGFQ99075 208 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 SLC30A3Q99726 388 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.4□□□□□ -0.12e-6■■■■■ 36.4
CDT1-201ENST00000301019 TMEM9Q9P0T7 183 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 KLHL8Q9P2G9 620 aaPredicted RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 CD300AQ9UGN4 299 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 VPS28Q9UK41 221 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 SATB2Q9UPW6 733 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 LRRC14BA6NHZ5 514 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 CAPNS1P04632 268 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 HSPA1AP0DMV8 641 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 HSPA1BP0DMV9 641 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 PTPN7P35236 360 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 HK2P52789 917 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 TBC1D21Q8IYX1 336 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 MFSD2AQ8NA29 543 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 TMBIM1Q969X1 311 aa14.4□□□□□ -0.1
CDT1-201ENST00000301019 GPN2Q9H9Y4 310 aaPredicted RBP14.4□□□□□ -0.1
CDT1-201ENST00000301019 SPATA31C2B4DYI2 1134 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TSPAN4O14817 238 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TIMM44O43615 452 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 MICAL2O94851 1124 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 PGAM1P18669 254 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 CAPN3P20807 821 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 YWHAEP62258 255 aaKnown RBP14.39□□□□□ -0.11
CDT1-201ENST00000301019 CD47Q08722 323 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 STRADAQ7RTN6 431 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 THAP5Q7Z6K1 395 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 KCNMB4Q86W47 210 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 HTR3CQ8WXA8 447 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 RORBQ92753 470 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 ZHX1-C8orf76Q96EF9 292 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 ASPSCR1Q9BZE9 553 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 EIF3LQ9Y262 564 aaKnown RBP14.39□□□□□ -0.11
CDT1-201ENST00000301019 A0A0X1KG70 313 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 SMLR1H3BR10 107 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 ALX3O95076 343 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 NMBRP28336 390 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 EMX1Q04741 257 aaPredicted RBP14.39□□□□□ -0.11
CDT1-201ENST00000301019 HIST2H2ACQ16777 129 aaPredicted RBP14.39□□□□□ -0.11
CDT1-201ENST00000301019 GDPD3Q7L5L3 318 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 FUNDC1Q8IVP5 155 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 METTL4Q8N3J2 472 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 OR6Q1Q8NGQ2 317 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 BRSK1Q8TDC3 778 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 UBE2FQ969M7 185 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TMEM39AQ9NV64 488 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TMEM181Q9P2C4 612 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 MAP10Q9P2G4 905 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 CPNE6O95741 557 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 CNTFP26441 200 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 SLC26A2P50443 739 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 GRSF1Q12849 480 aaKnown RBP eCLIP14.39□□□□□ -0.113e-19■■■■■ 98.5
CDT1-201ENST00000301019 AMHR2Q16671 573 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TBRG1Q3YBR2 411 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 BTBD8Q5XKL5 378 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 MIER2Q8N344 545 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 MCOLN3Q8TDD5 553 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 JPH3Q8WXH2 748 aaPredicted RBP14.39□□□□□ -0.11
CDT1-201ENST00000301019 NIF3L1Q9GZT8 377 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 VPS33BQ9H267 617 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 GGA3Q9NZ52 723 aa14.39□□□□□ -0.11
CDT1-201ENST00000301019 TTC34A8MYJ7 566 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 H0YJX3 145 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 TP53P04637 393 aaPredicted RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 EIF2S1P05198 315 aaKnown RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 LIMK2P53671 638 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 IFRD2Q12894 506 aaPredicted RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 NFYCQ13952 458 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 GRB7Q14451 532 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 GLYATQ6IB77 296 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 FAM86B1Q8N7N1 296 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 TRPV3Q8NET8 790 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 OR13J1Q8NGT2 312 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ZSCAN5AQ9BUG6 496 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 MRIQ9BWK5 157 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 ZNF341Q9BYN7 854 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 RERGLQ9H628 205 aa14.38□□□□□ -0.11
CDT1-201ENST00000301019 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
CDT1-201ENST00000301019 RANGRFQ9HD47 186 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms