RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM45BPQ6NSW5 357 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 C8orf82Q6P1X6 216 aaPredicted RBP24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 FIBCD1Q8N539 461 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 FAM45AQ8TCE6 357 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 SERPINB11Q96P15 392 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 C1orf50Q9BV19 199 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 MUC3BQ9H195 1237 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 SMOXQ9NWM0 555 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 GALPQ9UBC7 116 aa24.35■■□□□ 1.49
SPTSSA-201ENST00000298130 SUPT3HB4E1H0 165 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 SUPT3HO75486 399 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 CAPN15O75808 1086 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 HOXC8P31273 242 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 CDKN1CP49918 316 aaPredicted RBP24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 AGTR2P50052 363 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 NHSL2Q5HYW2 709 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 DDI1Q8WTU0 396 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 RPRD1AQ96P16 312 aaPredicted RBP24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 CLASP2O75122 1294 aaKnown RBP24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 STAMBPO95630 424 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 EEF1DP29692 281 aaKnown RBP24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC14A2Q15849 920 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 LPCAT2Q7L5N7 544 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 OFCC1Q8IZS5 231 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 TRPV1Q8NER1 839 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 STON2Q8WXE9 905 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 TMEM74Q96NL1 305 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 ACOX2Q99424 681 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 POLG2Q9UHN1 485 aa24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 CNOT11Q9UKZ1 510 aaKnown RBP24.34■■□□□ 1.49
SPTSSA-201ENST00000298130 FXYD1O00168 92 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 WISP3O95389 354 aaPredicted RBP24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 USP41Q3LFD5 358 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 PAQR3Q6TCH7 311 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 L3HYPDHQ96EM0 354 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 FBXL20Q96IG2 436 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 HBEGFQ99075 208 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 EFHD1Q9BUP0 239 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 MRPL40Q9NQ50 206 aaKnown RBP24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 RNF103-CHMP3A0A140T963 221 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 M0QZQ0 153 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 CYP11A1P05108 521 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 ZNF37AP17032 561 aaPredicted RBP24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 PLIN5Q00G26 463 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 UMODL1-AS1Q8N2C9 162 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 MIER2Q8N344 545 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 PCYOX1LQ8NBM8 494 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 SLC27A5Q9Y2P5 690 aa24.33■■□□□ 1.49
SPTSSA-201ENST00000298130 DHRS12A0PJE2 317 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 DLGAP1O14490 977 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 INPP4BO15327 924 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 HSPA8P11142 646 aaKnown RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 TUSC3Q13454 348 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 POLD3Q15054 466 aaPredicted RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 CMTR2Q8IYT2 770 aaKnown RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 CYGBQ8WWM9 190 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 RSL24D1Q9UHA3 163 aaKnown RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 NDUFAF1Q9Y375 327 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 A0A0D9SEW6 157 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 CDC7O00311 574 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 CRCPO75575 148 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 TMCC1O94876 653 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 FDXRP22570 491 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 SLC6A2P23975 617 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 GALK1P51570 392 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 TSNQ15631 228 aaKnown RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 ERMP1Q7Z2K6 904 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 PRDM5Q9NQX1 630 aaPredicted RBP24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 OAZ3Q9UMX2 235 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 NOD1Q9Y239 953 aa24.32■■□□□ 1.48
SPTSSA-201ENST00000298130 GPR182O15218 404 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 KPNA6O60684 536 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 ZNF23P17027 643 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 OR1E1P30953 314 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 CHST15Q7LFX5 561 aaPredicted RBP24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 PHYKPLQ8IUZ5 450 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 ZNF683Q8IZ20 524 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 DCUN1D5Q9BTE7 237 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 TSPAN3O60637 253 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 CELF2O95319 508 aaKnown RBP24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 UGT3A1Q6NUS8 523 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 FAM81AQ8TBF8 368 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 SLC39A13Q96H72 371 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 TCF12Q99081 682 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 GPATCH1Q9BRR8 931 aaKnown RBP24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 PNPLA3Q9NST1 481 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 RHBDL2Q9NX52 303 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 EBF1Q9UH73 591 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 TLR6Q9Y2C9 796 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 RAMP2O60895 175 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 RHOQP17081 205 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 STT3AP46977 705 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 ZBTB46Q86UZ6 589 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 TOP1MTQ969P6 601 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 NSMCE3Q96MG7 304 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 SLC30A3Q99726 388 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 GALNT8Q9NY28 637 aa24.31■■□□□ 1.48
SPTSSA-201ENST00000298130 RHOBTB1O94844 696 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 HPCAP84074 193 aa24.3■■□□□ 1.48
SPTSSA-201ENST00000298130 CYP51A1Q16850 503 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms