RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DGAT1O75907 488 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF432O94892 652 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 AHSA1O95433 338 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 IFNA21P01568 189 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NRIP1P48552 1158 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NPY2RP49146 381 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FAM91A1Q658Y4 838 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 STAG3L4Q8TBR4 150 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 OR51B5Q9H339 312 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NXF3Q9H4D5 531 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HEBP1Q9NRV9 189 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 AP1M2Q9Y6Q5 423 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DOCK1Q14185 1865 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 SUV39H1O43463 412 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 VLDLRP98155 873 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 PEX6Q13608 980 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 PCBP1Q15365 356 aaKnown RBP eCLIP4.84□□□□□ -1.64
CSMD3-201ENST00000297405 FBXO47Q5MNV8 452 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 C19orf35Q6ZS72 473 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 BHLHE41Q9C0J9 482 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-201ENST00000297405 ROGDIQ9GZN7 287 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 MKRN2Q9H000 416 aaKnown RBP4.84□□□□□ -1.64
CSMD3-201ENST00000297405 RGCCQ9H4X1 137 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 UCKL1Q9NWZ5 548 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 HSPE1-MOB4S4R3N1 261 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 RFPL1O75677 317 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 SLITRK5O94991 958 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 RENBPP51606 427 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 ATP6V0D1P61421 351 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 FOXM1Q08050 763 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 KCNA10Q16322 511 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 PID1Q7Z2X4 250 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 TCP10LQ8TDR4 215 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 RBAKQ9NYW8 714 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-201ENST00000297405 MUC4Q99102 2169 aa4.84□□□□□ -1.64
CSMD3-201ENST00000297405 AQP12BA6NM10 295 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 M0R129 80 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PRAF2O60831 178 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ERBB2P04626 1255 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 THEGLP0DJG4 465 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CDH1P12830 882 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MAPK8P45983 427 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FXR1P51114 621 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CTSWP56202 376 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 STARD3Q14849 445 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PIK3R6Q5UE93 754 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ANXA8L1Q5VT79 327 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 WDR53Q7Z5U6 358 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ADAMTSL2Q86TH1 951 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 TMC8Q8IU68 726 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MMAAQ8IVH4 418 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 AQP12AQ8IXF9 295 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 SLC35F3Q8IY50 421 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 C7orf57Q8NEG2 295 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 OR8K3Q8NH51 312 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 NKX2-3Q8TAU0 364 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF512Q96ME7 567 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 NFKBIZQ9BYH8 718 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 DHX35Q9H5Z1 703 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 HECW2Q9P2P5 1572 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PCDHA3Q9Y5H8 950 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CSPG4Q6UVK1 2322 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PNMA6EA0A0J9YXQ4 647 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 RHPN2P1A8MT19 583 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 NMT2O60551 498 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 TACSTD2P09758 323 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ETFAP13804 333 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ARF5P84085 180 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 C4orf46Q504U0 113 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF697Q5TEC3 545 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 OR6B2Q6IFH4 312 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FNDC5Q8NAU1 212 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 OR4A15Q8NGL6 344 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 SAMHD1Q9Y3Z3 626 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MRASO14807 208 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 CREBL2O60519 120 aaPredicted RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 GJB6O95452 261 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 GH1P01241 217 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 NFICP08651 508 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FXR2P51116 673 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 C11orf91Q3C1V1 193 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MOXD1Q6UVY6 613 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 DPY19L3Q6ZPD9 716 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 TIPARPQ7Z3E1 657 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 DAW1Q8N136 415 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 SMG8Q8ND04 991 aaKnown RBP4.83□□□□□ -1.64
CSMD3-201ENST00000297405 UFD1Q92890 307 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MOAP1Q96BY2 351 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ANAPC1Q9H1A4 1944 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ERVV-2B6SEH9 535 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FAM189A1O60320 539 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 ENTPD6O75354 484 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 PDE8BO95263 885 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 DNTTP04053 509 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 MATN1P21941 496 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 IDI1Q13907 227 aa4.83□□□□□ -1.64
CSMD3-201ENST00000297405 FGL2Q14314 439 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms