RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 C2CD4AQ8NCU7 369 aaPredicted RBP9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ARRDC2Q8TBH0 407 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 SLC22A17Q8WUG5 538 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 NRG4Q8WWG1 115 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 ASB8Q9H765 288 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 CLIC5Q9NZA1 410 aa9.29□□□□□ -0.92
PRDM9-201ENST00000296682 MTX2O75431 263 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 TMCC1O94876 653 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 MT-ND1P03886 318 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 XRCC1P18887 633 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CSKP41240 450 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 C6orf10Q5SRN2 563 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CMTM8Q8IZV2 173 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF461Q8TAF7 563 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJB14Q8TBM8 379 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 GDPD5Q8WTR4 605 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CLSTN3Q9BQT9 956 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ADGRE3Q9BY15 652 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CIPCQ9C0C6 399 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 TNFRSF12AQ9NP84 129 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 GALPQ9UBC7 116 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 SCOCQ9UIL1 159 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 COPG1Q9Y678 874 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 A0A087X1B8 175 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 A0A088AWK7 358 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 TRPC5OSA6NMA1 111 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PRAMEF11O60813 436 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 VPS26AO75436 327 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 RPP40O75818 363 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 HGFP14210 728 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PEX2P28328 305 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PPARGP37231 505 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 THOP1P52888 689 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 YBEYP58557 167 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 C1QTNF8P60827 252 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 VPS26BQ4G0F5 336 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ADGRF1Q5T601 910 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PSAPL1Q6NUJ1 521 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 IYDQ6PHW0 289 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PIANPQ8IYJ0 282 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 BRSK1Q8TDC3 778 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 LINGO1Q96FE5 620 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 IGSF21Q96ID5 467 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 C1orf74Q96LT6 269 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CERS4Q9HA82 394 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 POLR3BQ9NW08 1133 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 SNX13Q9Y5W8 968 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 UNC80Q8N2C7 3258 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CAPN8A6NHC0 703 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PFDN6O15212 129 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 GRID2O43424 1007 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 LDB2O43679 373 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 SEC24DO94855 1032 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 FGF1P05230 155 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ATP6V1B1P15313 513 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 LPOP22079 712 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 AKT1P31749 480 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 GDF5P43026 501 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 STK19P49842 368 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 NRG1Q02297 640 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 CYTH1Q15438 398 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 C18orf21Q32NC0 220 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PLA2G4EQ3MJ16 856 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 FAM126BQ8IXS8 530 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 PTERQ96BW5 349 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 HGH1Q9BTY7 390 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 MMADHCQ9H3L0 296 aaPredicted RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 MRM3Q9HC36 420 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ZDHHC4Q9NPG8 344 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 DNAJC28Q9NX36 388 aa9.28□□□□□ -0.92
PRDM9-201ENST00000296682 GMPR2Q9P2T1 348 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 LSM7Q9UK45 103 aaKnown RBP9.28□□□□□ -0.92
PRDM9-201ENST00000296682 ANGPT2O15123 496 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 SMAD6O43541 496 aaKnown RBP9.27□□□□□ -0.92
PRDM9-201ENST00000296682 CCNT2O60583 730 aaKnown RBP9.27□□□□□ -0.92
PRDM9-201ENST00000296682 CLDN11O75508 207 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 PRAMEF12O95522 483 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 SBK3P0C264 359 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 CCL5P13501 91 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 HLA-DPA1P20036 260 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 XPAP23025 273 aaPredicted RBP9.27□□□□□ -0.92
PRDM9-201ENST00000296682 ADRA1AP35348 466 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 FOXA1P55317 472 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 HSPA14Q0VDF9 509 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 ARHGEF7Q14155 803 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 AFMIDQ63HM1 303 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 TMEM207Q6UWW9 146 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 MILR1Q7Z6M3 343 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 APCDD1Q8J025 514 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 EEF1AKMT1Q8WVE0 214 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 ING5Q8WYH8 240 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 PAWRQ96IZ0 340 aaKnown RBP9.27□□□□□ -0.92
PRDM9-201ENST00000296682 ZNF333Q96JL9 665 aa9.27□□□□□ -0.92
PRDM9-201ENST00000296682 CNBD2Q96M20 576 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms