RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CYB5D2Q8WUJ1 264 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 KCTD4Q8WVF5 259 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 EBF3Q9H4W6 596 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 NMRAL1Q9HBL8 299 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 PKP3Q9Y446 797 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 BPTFQ12830 3046 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 A0A1W2PQ67 120 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 DLDP09622 509 aaKnown RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 PRSS56P0CW18 603 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 MC4RP32245 332 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 FCHO2Q0JRZ9 810 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 BST1Q10588 318 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 PTPRNQ16849 979 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 CES4AQ5XG92 561 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 TANGO2Q6ICL3 276 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ZNF549Q6P9A3 640 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 TMEM151AQ8N4L1 468 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 CHST14Q8NCH0 376 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 SORCS1Q8WY21 1168 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 MYLIPQ8WY64 445 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 TSNARE1Q96NA8 513 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 GPR78Q96P69 363 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ZFYVE1Q9HBF4 777 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ZFP14Q9HCL3 533 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 BPIFA1Q9NP55 256 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 HPS4Q9NQG7 708 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 CLEC1BQ9P126 229 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ARL2BPQ9Y2Y0 163 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 KIAA1549LQ6ZVL6 1849 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 A0A0U1RQS6 177 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 OTOL1A6NHN0 477 aaPredicted RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 G3V2L1 256 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 BNIP3LO60238 219 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 SNNO75324 88 aaPredicted RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 KLHL2O95198 593 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ATP5BP06576 529 aaKnown RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 FGF3P11487 239 aaPredicted RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 CPA3P15088 417 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 PMLP29590 882 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 NNMTP40261 264 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 SF3A3Q12874 501 aaKnown RBP eCLIP15.51■□□□□ 0.07
LSM6-201ENST00000296581 DLG1Q12959 904 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 TSNAXIP1Q2TAA8 658 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 ATAT1Q5SQI0 421 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 VITQ6UXI7 678 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 PAF1Q8N7H5 531 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 RDH11Q8TC12 318 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 LPGAT1Q92604 370 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 SCRN2Q96FV2 425 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 C7orf26Q96N11 449 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 MCCC1Q96RQ3 725 aaPredicted RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 YIPF3Q9GZM5 350 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 S1PR5Q9H228 398 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 CHCHD3Q9NX63 227 aaKnown RBP15.51■□□□□ 0.07
LSM6-201ENST00000296581 MID2Q9UJV3 735 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 CRYL1Q9Y2S2 319 aa15.51■□□□□ 0.07
LSM6-201ENST00000296581 TTC34A8MYJ7 566 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 TGDSO95455 350 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 FDXRP22570 491 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 RECQLP46063 649 aaPredicted RBP15.5■□□□□ 0.07
LSM6-201ENST00000296581 OCRLQ01968 901 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SPRED3Q2MJR0 410 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SLC30A9Q6PML9 568 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 OR6Y1Q8NGX8 325 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 CIPCQ9C0C6 399 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 LMCD1Q9NZU5 365 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 RUVBL2Q9Y230 463 aaKnown RBP15.5■□□□□ 0.07
LSM6-201ENST00000296581 VPS9D1Q9Y2B5 631 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 LAMA3Q16787 3333 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 C1orf232A0A0U1RR37 186 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 ATP6V1G2O95670 118 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 UGT2B4P06133 528 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SBK3P0C264 359 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 KCNA4P22459 653 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SLC26A3P40879 764 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SUOXP51687 545 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 CDKN2DP55273 166 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 CWF19L1Q69YN2 538 aaKnown RBP15.5■□□□□ 0.07
LSM6-201ENST00000296581 PSAPL1Q6NUJ1 521 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 GDPD4Q6W3E5 623 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 C10orf107Q8IVU9 208 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 PIANPQ8IYJ0 282 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 TNS4Q8IZW8 715 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 TTC8Q8TAM2 541 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 NXNL1Q96CM4 212 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 MYADMQ96S97 322 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 HEPHQ9BQS7 1158 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 AARSD1Q9BTE6 412 aaKnown RBP15.5■□□□□ 0.07
LSM6-201ENST00000296581 POPDC3Q9HBV1 291 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 IGSF5Q9NSI5 407 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 ELOVL2Q9NXB9 296 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 SLC8A2Q9UPR5 921 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 C15orf41Q9Y2V0 281 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 WASF2Q9Y6W5 498 aa15.5■□□□□ 0.07
LSM6-201ENST00000296581 MUC22E2RYF6 1773 aaPredicted RBP15.49■□□□□ 0.07
LSM6-201ENST00000296581 DENND4AQ7Z401 1863 aa15.49■□□□□ 0.07
LSM6-201ENST00000296581 CDH23Q9H251 3354 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms