RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 FAM105AQ9NUU6 356 aa13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 SIRT5Q9NXA8 310 aa13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 ABI2Q9NYB9 513 aaPredicted RBP13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 ARL5AQ9Y689 179 aa13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 COL1A2P08123 1366 aa13.27□□□□□ -0.29
KCNIP3-201ENST00000295225 NR5A2O00482 541 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CASQ2O14958 399 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 GPR39O43194 453 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 MYL4P12829 197 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 GALNT3Q14435 633 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CYHR1Q6ZMK1 362 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 ADGRG6Q86SQ4 1221 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PGAM4Q8N0Y7 254 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PPHLN1Q8NEY8 458 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 ISL2Q96A47 359 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 MYEOVQ96EZ4 313 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PRICKLE1Q96MT3 831 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 SERINC2Q96SA4 455 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CFL2Q9Y281 166 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 RNF11Q9Y3C5 154 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 UBDO15205 165 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 STRNO43815 780 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 OLFM2O95897 454 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 NCK1P16333 377 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CCR1P32246 355 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CBLBQ13191 982 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 GRB7Q14451 532 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 STK11Q15831 433 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 AAK1Q2M2I8 961 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 C16orf54Q6UWD8 224 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 RETREG3Q86VR2 466 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 TMEM102Q8N9M5 508 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 KCTD13Q8WZ19 329 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PSMG2Q969U7 264 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 FAM192AQ9GZU8 254 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CNGB3Q9NQW8 809 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 NEU3Q9UQ49 428 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 FAM32AQ9Y421 112 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 TCAF1Q9Y4C2 921 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 RRN3P2A6NIE6 340 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PSMD12O00232 456 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 AKAP10O43572 662 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 ALDOCP09972 364 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 LINC00032P0C843 101 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CDK4P11802 303 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 BMP1P13497 986 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 EVI2BP34910 448 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 MTHFRP42898 656 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 IGSF11Q5DX21 431 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 DDIASQ8IXT1 998 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 NUP93Q8N1F7 819 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 TEX19Q8NA77 164 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PTERQ96BW5 349 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 HIC2Q96JB3 615 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 TBATAQ96M53 351 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 TMEM79Q9BSE2 394 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CACNA2D2Q9NY47 1150 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 IPO11Q9UI26 975 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 AP4S1Q9Y587 144 aa13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 PDCD11Q14690 1871 aaKnown RBP13.26□□□□□ -0.29
KCNIP3-201ENST00000295225 H3BMM5 538 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 UBXN8O00124 270 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 CDK2AP1O14519 115 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 XPOTO43592 962 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 B4GALT3O60512 393 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 RNGTTO60942 597 aaKnown RBP13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 TMCC2O75069 709 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 CD52P31358 61 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 KPNA1P52294 538 aaPredicted RBP13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 SLC5A3P53794 718 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 LSAMPQ13449 338 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 NAB1Q13506 487 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 GRM2Q14416 872 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 HMBOX1Q6NT76 420 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 CFAP52Q8N1V2 620 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 OR13C4Q8NGS5 318 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 HMCESQ96FZ2 354 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 ZNF385DQ9H6B1 395 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 CD93Q9NPY3 652 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 PRKAB1Q9Y478 270 aa13.25□□□□□ -0.29
KCNIP3-201ENST00000295225 ERI2A8K979 691 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms