RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 ABHD18Q0P651 414 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 MRPL49Q13405 166 aaKnown RBP15.67■□□□□ 0.1
UBXN1-201ENST00000294119 TRA2AQ13595 282 aaKnown RBP eCLIP15.67■□□□□ 0.13e-8■■■□□ 15
UBXN1-201ENST00000294119 C5orf22Q49AR2 442 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 MAP9Q49MG5 647 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 C14orf28Q4W4Y0 310 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 BRMS1LQ5PSV4 323 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 HID1Q8IV36 788 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 NLGN4XQ8N0W4 816 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 UBL4BQ8N7F7 174 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 BMPERQ8N8U9 685 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 NLGN4YQ8NFZ3 816 aaPredicted RBP15.67■□□□□ 0.1
UBXN1-201ENST00000294119 TSACCQ96A04 125 aaPredicted RBP15.67■□□□□ 0.1
UBXN1-201ENST00000294119 RAB7BQ96AH8 199 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 CFAP57Q96MR6 1250 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 NUDT22Q9BRQ3 303 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 CYP4F12Q9HCS2 524 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 ABCA2Q9BZC7 2435 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 CCDC168Q8NDH2 2452 aa15.67■□□□□ 0.1
UBXN1-201ENST00000294119 NIPBLQ6KC79 2804 aaeCLIP15.66■□□□□ 0.1
UBXN1-201ENST00000294119 CTAGE9A4FU28 777 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 TMEM110-MUSTN1A8MSY1 372 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 AREL1O15033 823 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 RASGRP1O95267 797 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 CTSEP14091 401 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 COMTP21964 271 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 CASQ1P31415 396 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 SULT1E1P49888 294 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 LIMK2P53671 638 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 OGDHQ02218 1023 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 DEUP1Q05D60 604 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 BOLA3Q53S33 107 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 MEI1Q5TIA1 1274 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 KCTD16Q68DU8 428 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 BNIPLQ7Z465 357 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 POLNQ7Z5Q5 900 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 NT5DC3Q86UY8 548 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 C17orf82Q86X59 251 aaPredicted RBP15.66■□□□□ 0.1
UBXN1-201ENST00000294119 PSTKQ8IV42 348 aaKnown RBP15.66■□□□□ 0.1
UBXN1-201ENST00000294119 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 SLC35F6Q8N357 371 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 FAM172AQ8WUF8 416 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 KIAA1143Q96AT1 154 aaPredicted RBP15.66■□□□□ 0.1
UBXN1-201ENST00000294119 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 CCDC74BQ96LY2 380 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 TBCBQ99426 244 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 TNKS2Q9H2K2 1166 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 ITM2BQ9Y287 266 aa15.66■□□□□ 0.1
UBXN1-201ENST00000294119 HNRNPRO43390 633 aaKnown RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 PSTPIP1O43586 416 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 PRPSAP2O60256 369 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 LRCH4O75427 683 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TCN2P20062 427 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 CTNNA2P26232 953 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 ATP11AP98196 1134 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 NME3Q13232 169 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 RPS6KA1Q15418 735 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TCEA2Q15560 299 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TRNP1Q6NT89 227 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 UNC5BQ8IZJ1 945 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 AGBL5Q8NDL9 886 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 MARVELD3Q96A59 401 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 RTP4Q96DX8 246 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 C16orf45Q96MC5 204 aaPredicted RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 NAPGQ99747 312 aaPredicted RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 C2orf49Q9BVC5 232 aaPredicted RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 WDCPQ9H6R7 721 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 DDX56Q9NY93 547 aaKnown RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TLK1Q9UKI8 766 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TMEM184BQ9Y519 407 aaPredicted RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 DGKBQ9Y6T7 804 aa15.65■□□□□ 0.1
UBXN1-201ENST00000294119 TNRC6AQ8NDV7 1962 aaKnown RBP15.65■□□□□ 0.1
UBXN1-201ENST00000294119 CHD5Q8TDI0 1954 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 SPG11Q96JI7 2443 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 CLDN11O75508 207 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 THRAP10827 490 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 TNNT1P13805 278 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 CD1CP29017 333 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 SSR1P43307 286 aaKnown RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 CXCR3P49682 368 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 RAB15P59190 212 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 SQSTM1Q13501 440 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 AUHQ13825 339 aaKnown RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 TUBB2AQ13885 445 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 ARHGEF7Q14155 803 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 C15orf59Q2T9L4 293 aaPredicted RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 DCAF12Q5T6F0 453 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 ANKS6Q68DC2 871 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 DCAF4L2Q8NA75 395 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 KIF18AQ8NI77 898 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 TEKT4Q8WW24 435 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 HES6Q96HZ4 224 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 RPRD1AQ96P16 312 aaPredicted RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 TEFMQ96QE5 360 aaKnown RBP15.64■□□□□ 0.09
UBXN1-201ENST00000294119 HEPHQ9BQS7 1158 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 TUBB2BQ9BVA1 445 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 OCIAD1Q9NX40 245 aa15.64■□□□□ 0.09
UBXN1-201ENST00000294119 SLC39A1Q9NY26 324 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms