RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FMO1Q01740 532 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 GPNMBQ14956 572 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ATAD3BQ5T9A4 648 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RBM23Q86U06 439 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ALG3Q92685 438 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 SENP8Q96LD8 212 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 KLHL1Q9NR64 748 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 VPS28Q9UK41 221 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 PACSIN3Q9UKS6 424 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 E5RJQ4 531 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 HAT1O14929 419 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 USP12O75317 370 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 BPGMP07738 259 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 NFICP08651 508 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TYMPP19971 482 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 HPCAL1P37235 193 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 GALK1P51570 392 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 EIF2B5Q13144 721 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ALFQ53S48 1182 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 RETSATQ6NUM9 610 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 COLGALT2Q8IYK4 626 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TBC1D21Q8IYX1 336 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZNF614Q8N883 585 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 LPCAT1Q8NF37 534 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 REPS1Q96D71 796 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 PANX3Q96QZ0 392 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 GTF2A1LQ9UNN4 478 aa11.84□□□□□ -0.51
SYNGAP1-201ENST00000293748 TCRBV9S1A1TA0A576 114 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 FYNP06241 537 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ARL4DP49703 201 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 RAB15P59190 212 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ENPEPQ07075 957 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAPKAPK3Q16644 382 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 METTL21CQ5VZV1 264 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ARMC6Q6NXE6 501 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 FITM2Q8N6M3 262 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRMOQ9BU70 441 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 OSBPL7Q9BZF2 842 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 RPRD1BQ9NQG5 326 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 VPS45Q9NRW7 570 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ING4Q9UNL4 249 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 UBXN8O00124 270 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 TMCC2O75069 709 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ALDH1A2O94788 518 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 CTSAP10619 480 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 NPR3P17342 541 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 AKAP14Q86UN6 197 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 PPP3R2Q96LZ3 170 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 SERPINB11Q96P15 392 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 CLN6Q9NWW5 311 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 TRPM5Q9NZQ8 1165 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ERGIC3Q9Y282 383 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 TBC1D30Q9Y2I9 924 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 LTFP02788 710 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 CCDC166P0CW27 439 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 VCLP18206 1134 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 PSMB4P28070 264 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 TUBP50607 506 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 MARSP56192 900 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 FCHO2Q0JRZ9 810 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ITIH5Q86UX2 942 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 SYT12Q8IV01 421 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 LRRC17Q8N6Y2 441 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 PTGR2Q8N8N7 351 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR52K1Q8NGK4 314 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 NAT14Q8WUY8 206 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 NACC2Q96BF6 587 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 NMUR2Q9GZQ4 415 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 ALG9Q9H6U8 611 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 EVPLQ92817 2033 aa11.83□□□□□ -0.52
SYNGAP1-201ENST00000293748 BBIP1A8MTZ0 92 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 NOS3P29474 1203 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 NRIP1P48552 1158 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDK9P50750 372 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CLCNKBP51801 687 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CCNHP51946 323 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PFKFB4Q16877 469 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ATAT1Q5SQI0 421 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF549Q6P9A3 640 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 VN1R5Q7Z5H4 357 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 HIPK1Q86Z02 1210 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 OFCC1Q8IZS5 231 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 PDPRQ8NCN5 879 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 DNAJB14Q8TBM8 379 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 COX4I2Q96KJ9 171 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF670Q9BS34 389 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 OSBPL6Q9BZF3 934 aa11.82□□□□□ -0.52
SYNGAP1-201ENST00000293748 CDH19Q9H159 772 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms