RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SLC6A15Q9H2J7 730 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 COG5Q9UP83 839 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CARD8Q9Y2G2 431 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SNX9Q9Y5X1 595 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 DUOX1Q9NRD9 1551 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PPIP5K1Q6PFW1 1433 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 A8MXE2 369 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ASAP2O43150 1006 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 USP12O75317 370 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GBAP04062 536 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HMBSP08397 361 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 STAG3L1P0CL83 205 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TROVE2P10155 538 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD1-201ENST00000284049 ACP5P13686 325 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 KELP23276 732 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 AVPR2P30518 371 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HNF1BP35680 557 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GABRB2P47870 512 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SYT16Q17RD7 645 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 AAK1Q2M2I8 961 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 WSCD2Q2TBF2 565 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ARHGAP17Q68EM7 881 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SLC39A5Q6ZMH5 540 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 FAM214BQ7L5A3 538 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PRRT2Q7Z6L0 340 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 SCYL3Q8IZE3 742 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PI4KAP1Q8N8J0 262 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 MARS2Q96GW9 593 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 TPD52L3Q96J77 140 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SRSF8Q9BRL6 282 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 INPP5KQ9BT40 448 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 NCOR1P1Q9H4R4 102 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SIRT3Q9NTG7 399 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 CNIH4Q9P003 139 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 OSGIN1Q9UJX0 560 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PLA2G4CQ9UP65 541 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 EXOC6BQ9Y2D4 811 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ZBTB1Q9Y2K1 713 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 JRKLQ9Y4A0 524 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 KIF16BQ96L93 1317 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 FRMD3A2A2Y4 597 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 DPPA5A6NC42 116 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 USP17L23D6RBM5 183 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RBAK-RBAKDNI3L0D1 243 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RECQL4O94761 1208 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HIST1H2ABP04908 130 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HIST1H2ADP20671 130 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CORO1AP31146 461 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 LONP1P36776 959 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 EPS15P42566 896 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GBX2P52951 348 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 NCKAP1LP55160 1127 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ATP5IP56385 69 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 RIPK1Q13546 671 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 IL11RAQ14626 422 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TSTD2Q5T7W7 516 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 DENND2CQ68D51 928 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 INTS5Q6P9B9 1019 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 SEM1Q6ZVN7 128 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HIST3H2AQ7L7L0 130 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 VSIG10LQ86VR7 867 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 MISPQ8IVT2 679 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PHC2Q8IXK0 858 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TTLL6Q8N841 843 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RTL3Q8N8U3 475 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 RBM15BQ8NDT2 890 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 DHX58Q96C10 678 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SPATA13Q96N96 652 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 MESP1Q9BRJ9 268 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 FAM213AQ9BRX8 229 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TBC1D10AQ9BXI6 508 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 IQCGQ9H095 443 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 SPATC1LQ9H0A9 340 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 FBXO34Q9NWN3 711 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CLIP2Q9UDT6 1046 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 MRPS7Q9Y2R9 242 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 TMED5Q9Y3A6 229 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RAP2CQ9Y3L5 183 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 FAM237AA0A1B0GTK4 181 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 NVLO15381 856 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 ZNF208O43345 1280 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 WDR47O94967 919 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HEXIM1O94992 359 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 FCER1AP12319 257 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SERPINB6P35237 376 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SOX6P35712 828 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ACAA2P42765 397 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 PRCPP42785 496 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 KCNJ1P48048 391 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ACTR1AP61163 376 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RPL15P61313 204 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 SNRPEP62304 92 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 BEX3Q00994 111 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RABL6Q3YEC7 729 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 PLA2G4FQ68DD2 849 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TMEM211Q6ICI0 200 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 AADACL2Q6P093 401 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 EIF3MQ7L2H7 374 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 LRRC70Q7Z2Q7 622 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ADGRA1Q86SQ6 560 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms