RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TPP1O14773 563 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ORC5O43913 435 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 AMPD1P23109 780 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 OR8D1Q8WZ84 308 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 SMPDL3BQ92485 455 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 IMP3Q9NV31 184 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3DA0A087WVF3 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3IA0A087WXS9 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 VMACQ2NL98 169 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 BORCS5Q969J3 196 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 LGR4Q9BXB1 951 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 CDH19Q9H159 772 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 NOL4O94818 638 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 UBXN7O94888 489 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 PDK3Q15120 406 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 PMEPA1Q969W9 287 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 B3GNT4Q9C0J1 378 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 TREM1Q9NP99 234 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ZBTB11O95625 1053 aaPredicted RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 CD86P42081 329 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ASMTP46597 345 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 RPS9P46781 194 aaKnown RBP13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 CLCN7P51798 805 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 NDST1P52848 882 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 IKBKEQ14164 716 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ARSKQ6UWY0 536 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 FAM83AQ86UY5 434 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 ZNF366Q8N895 744 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 FUT8Q9BYC5 575 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
SMARCA5-201ENST00000283131 A0A0G2JLW4 131 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ARPC2O15144 300 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 MYL6P60660 151 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.34e-6■□□□□ 11.2
SMARCA5-201ENST00000283131 FRMD7Q6ZUT3 714 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 DPF2Q92785 391 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 MFSD3Q96ES6 412 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 LRRC46Q96FV0 321 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 AARSD1Q9BTE6 412 aaKnown RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ATXN10Q9UBB4 475 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 IFNA2P01563 188 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 GNAO1P09471 354 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ELFN1P0C7U0 828 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 IDO1P14902 403 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 KLHL26Q53HC5 615 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CPTPQ5TA50 214 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 TMIEQ8NEW7 156 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 LENG1Q96BZ8 264 aaPredicted RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 C15orf41Q9Y2V0 281 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 PCDHGB1Q9Y5G3 927 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 H3BM21 787 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CCNE2O96020 404 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 IL1R1P14778 569 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 VARSP26640 1264 aaKnown RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 FARSAQ9Y285 508 aaKnown RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CLCN5P51795 746 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 LNX2Q8N448 690 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 FBXO25Q8TCJ0 367 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 DEFB129Q9H1M3 183 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 DDX20Q9UHI6 824 aaKnown RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 PER2O15055 1255 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CPNE2Q96FN4 548 aaPredicted RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 CNOT6Q9ULM6 557 aaKnown RBP13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 HIF3AQ9Y2N7 669 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 ZNF132P52740 706 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 SELENOVP59797 346 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 PCID2Q5JVF3 399 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
SMARCA5-201ENST00000283131 TMC3Q7Z5M5 1100 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms