RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 WASHC1A8K0Z3 465 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 WASH3PC4AMC7 463 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ABHD2P08910 425 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 MSR1P21757 451 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ARCN1P48444 511 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ILF3Q12906 894 aaKnown RBP eCLIP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 FAM189A2Q15884 450 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 WASH2PQ6VEQ5 465 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 APTXQ7Z2E3 356 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 RGL4Q8IZJ4 473 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 AASSQ9UDR5 926 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 KCNE2Q9Y6J6 123 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CACNA1CQ13936 2221 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 AZIN1O14977 448 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 PSEN1P49768 467 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 DNAJB7Q7Z6W7 309 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 HEXDCQ8WVB3 486 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 DNASE1L2Q92874 299 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CPNE2Q96FN4 548 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ABI3Q9P2A4 366 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 A0A087X0B3 334 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NCK1P16333 377 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CYP4F8P98187 520 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 GRM3Q14832 879 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 PARP6Q2NL67 630 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SYVN1Q86TM6 617 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NINJ2Q9NZG7 142 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.72□□□□□ -1.011e-9■■■□□ 15.8
NIPBL-201ENST00000282516 TBC1D3BA6NDS4 549 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 WFS1O76024 890 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 PTX3P26022 381 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 GCNT1Q02742 428 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 LACTB2Q53H82 288 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 EIPR1Q53HC9 387 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ZDHHC20Q5W0Z9 365 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF227Q86WZ6 799 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TMEM17Q86X19 198 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SMG7Q92540 1137 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 BAP1Q92560 729 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NEDD4LQ96PU5 975 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SRRM3A6NNA2 597 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 DPYSL3Q14195 570 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SLC2A14Q8TDB8 520 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ENY2Q9NPA8 101 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ASAH2Q9NR71 780 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 RAB26Q9ULW5 256 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TFR2Q9UP52 801 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 IQGAP3Q86VI3 1631 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 LINGO3P0C6S8 592 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 MTHFRP42898 656 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 CDC42EP5Q6NZY7 148 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 LLGL2Q6P1M3 1020 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 FIP1L1Q6UN15 594 aaKnown RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 GPR180Q86V85 440 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 C17orf64Q86WR6 236 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 GPR135Q8IZ08 494 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 SDR16C5Q8N3Y7 309 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 FAM151AQ8WW52 585 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 TCEAL3Q969E4 200 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 HCN3Q9P1Z3 774 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 ALG5Q9Y673 324 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 FADS2P1A8MWK0 482 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 PEPDP12955 493 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 FOSL1P15407 271 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 SREBF1P36956 1147 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 HERVK_113P62684 666 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 PABPC1LQ4VXU2 614 aaKnown RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 CWF19L1Q69YN2 538 aaKnown RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 ADGRG6Q86SQ4 1221 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 TBC1D16Q8TBP0 767 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 ATG4CQ96DT6 458 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 POP1Q99575 1024 aaKnown RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 TMEM39BQ9GZU3 492 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 C5orf51A6NDU8 294 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 SLC37A4O43826 429 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 PSMB4P28070 264 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 SSR2P43308 183 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 VMACQ2NL98 169 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 AADACL4Q5VUY2 407 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 TAS1R2Q8TE23 839 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 NAT14Q8WUY8 206 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 TPK1Q9H3S4 243 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 MYOZ2Q9NPC6 264 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 ABCC13Q9NSE7 274 aa8.71□□□□□ -1.01
NIPBL-201ENST00000282516 USP42Q9H9J4 1324 aaKnown RBP8.71□□□□□ -1.01
NIPBL-201ENST00000282516 HCN1O60741 890 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ALDH2P05091 517 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 PGAM2P15259 253 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF12P17014 697 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 UBAP2LQ14157 1087 aaKnown RBP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CRY2Q49AN0 593 aa8.71□□□□□ -1.02
NIPBL-201ENST00000282516 CAPN13Q6MZZ7 669 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF720Q7Z2F6 126 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms