RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CCDC6Q16204 474 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TMC8Q8IU68 726 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TMPRSS6Q8IU80 811 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 LENG8Q96PV6 779 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SLC30A3Q99726 388 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 C2orf49Q9BVC5 232 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 PLA2G4CQ9UP65 541 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SLC4A7Q9Y6M7 1214 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 AIM2O14862 343 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 KRT36O76013 467 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 DNAJB1P25685 340 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 POLD2P49005 469 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 COPAP53621 1224 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TIAL1Q01085 375 aaKnown RBP eCLIP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 OR4D1Q15615 310 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 AFTPHQ6ULP2 937 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 Q6ZNB5 142 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 FRMD7Q6ZUT3 714 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 NAT16Q8N8M0 369 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 RIN3Q8TB24 985 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SIKE1Q9BRV8 207 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TRANK1O15050 2925 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TRIM24O15164 1050 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 RBP1P09455 135 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ZNF37AP17032 561 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ACVR1Q04771 509 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ACAP2Q15057 778 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 TEAD2Q15562 447 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ACSBG2Q5FVE4 666 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ARMC12Q5T9G4 340 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 UBE2Q1Q7Z7E8 422 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SUGP1Q8IWZ8 645 aaKnown RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 PTGR2Q8N8N7 351 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SIDT2Q8NBJ9 832 aaKnown RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 CFAP61Q8NHU2 1237 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 EID2BQ96D98 161 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 CDYLQ9Y232 598 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 SSX2IPQ9Y2D8 614 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 OR51B4Q9Y5P0 310 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 C1orf232A0A0U1RR37 186 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 NEDD8-MDP1E9PL57 170 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 FDXRP22570 491 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 RETSATQ6NUM9 610 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 ACAD11Q709F0 780 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 TMEM25Q86YD3 366 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 POF1BQ8WVV4 589 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 NSUN5Q96P11 429 aaKnown RBP17.89■□□□□ 0.45
CAPN1-201ENST00000279247 AARSD1Q9BTE6 412 aaKnown RBP17.89■□□□□ 0.45
CAPN1-201ENST00000279247 INTS6Q9UL03 887 aaKnown RBP17.89■□□□□ 0.45
CAPN1-201ENST00000279247 PKP3Q9Y446 797 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 SUPT3HB4E1H0 165 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 SUPT3HO75486 399 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 CD1DP15813 335 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 AOC1P19801 751 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 IRS1P35568 1242 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 PFKPQ01813 784 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 KLF10Q13118 480 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 LAMB3Q13751 1172 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 PIWIL4Q7Z3Z4 852 aaKnown RBP17.89■□□□□ 0.45
CAPN1-201ENST00000279247 CUZD1Q86UP6 607 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 ALG14Q96F25 216 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 MYO19Q96H55 970 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 C17orf80Q9BSJ5 609 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 IKZF3Q9UKT9 509 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 ARIH1Q9Y4X5 557 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-201ENST00000279247 HCFC2Q9Y5Z7 792 aa17.89■□□□□ 0.45
CAPN1-201ENST00000279247 CDC7O00311 574 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 EZRP15311 586 aaKnown RBP17.88■□□□□ 0.45
CAPN1-201ENST00000279247 ALOX15P16050 662 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-201ENST00000279247 TSNQ15631 228 aaKnown RBP17.88■□□□□ 0.45
CAPN1-201ENST00000279247 PPP1R3AQ16821 1122 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 SCUBE1Q8IWY4 988 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 DCBLD1Q8N8Z6 715 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 LPGAT1Q92604 370 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 LINC00597Q9H2U6 94 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 INSL6Q9Y581 213 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 PTGDR2Q9Y5Y4 395 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 E5RI56 91 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 CCND1P24385 295 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 PRKAA2P54646 552 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 SULT2A1Q06520 285 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 BCL2L1Q07817 233 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 CCDC149Q6ZUS6 474 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 SNX32Q86XE0 403 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 ULK2Q8IYT8 1036 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 DCAF4L2Q8NA75 395 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 TAS2R13Q9NYV9 303 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 ZNF711Q9Y462 761 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 EFCAB14O75071 495 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 CLDN7O95471 211 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 OLFM2O95897 454 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 LINC00271P0C7V0 271 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 UGT1A6P19224 532 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 UGT1A1P22309 533 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 UGT1A4P22310 534 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 UGT1A3P35503 534 aa17.88■□□□□ 0.45
CAPN1-201ENST00000279247 UGT1A5P35504 534 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms