RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 FBXL19Q6PCT2 694 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DOK6Q6PKX4 331 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GALNT15Q8N3T1 639 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SIPA1Q96FS4 1042 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TMEM39BQ9GZU3 492 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC6A15Q9H2J7 730 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RHBGQ9H310 441 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 IL1RAPQ9NPH3 570 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 BLOC1S4Q9NUP1 217 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 KRT33AO76009 404 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 CYP3A4P08684 503 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 MYBL2P10244 700 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TPSB2P20231 275 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ABCG1P45844 678 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 BACE1P56817 501 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 HUNKP57058 714 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 LIPEQ05469 1076 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TPSAB1Q15661 275 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GCNT6Q5T4J0 391 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 NPNTQ6UXI9 565 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF567Q8N184 647 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RBM15BQ8NDT2 890 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC44A1Q8WWI5 657 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 COL26A1Q96A83 441 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RNF31Q96EP0 1072 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 CIB1Q99828 191 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 OMDQ99983 421 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 YTHDF1Q9BYJ9 559 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZYG11BQ9C0D3 744 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DEFB129Q9H1M3 183 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TRIM17Q9Y577 477 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ELOVL7A1L3X0 281 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 XYLBO75191 536 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 PRKD3O94806 890 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RLN2P04090 185 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GNPDA1P46926 289 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 PPM1LQ5SGD2 360 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 PYHIN1Q6K0P9 492 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RAD51AP1Q96B01 352 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC22A4Q9H015 551 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ANKRA2Q9H9E1 313 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RC3H2Q9HBD1 1191 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DGKBQ9Y6T7 804 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC9A3R1O14745 358 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TOP3BO95985 862 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GNRH1P01148 92 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RB1P06400 928 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 S100A2P29034 98 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 CCNHP51946 323 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 OTOP1Q7RTM1 612 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 IQCKQ8N0W5 287 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RASGEF1CQ8N431 466 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TIFAQ96CG3 184 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TRNT1Q96Q11 434 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TMEM27Q9HBJ8 222 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 MRPS33Q9Y291 106 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF99A8MXY4 864 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RBMXL2O75526 392 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GIMD1P0DJR0 217 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC6A4P31645 630 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC12A3P55017 1021 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TPTEP56180 551 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RD3Q7Z3Z2 195 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SPPL2CQ8IUH8 684 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC9A9Q8IVB4 645 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 OR4L1Q8NH43 312 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAJB8Q8NHS0 232 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 LPGAT1Q92604 370 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TOP1MTQ969P6 601 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 INPP4AQ96PE3 977 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 GPATCH1Q9BRR8 931 aaKnown RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 EMC3Q9P0I2 261 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAJB4Q9UDY4 337 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RIIAD1A6NNX1 92 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 IFNW1P05000 195 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 HNRNPLP14866 589 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 USP41Q3LFD5 358 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF613Q6PF04 617 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 PRR23CQ6ZRP0 262 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 ZBTB46Q86UZ6 589 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 MPP5Q8N3R9 675 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAJA4Q8WW22 397 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 OSMRQ99650 979 aa8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 RCOR3Q9P2K3 495 aaPredicted RBP8.69□□□□□ -1.02
SCUBE3-201ENST00000274938 TULP4Q9NRJ4 1543 aa8.68□□□□□ -1.02
SCUBE3-201ENST00000274938 PLOD2O00469 737 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms