RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 AARSD1Q9BTE6 412 aaKnown RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SYTL2Q9HCH5 934 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 PNPOQ9NVS9 261 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 EVLQ9UI08 416 aaPredicted RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 HLA-FP30511 346 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 ARRB2P32121 409 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 MC4RP32245 332 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SULT2A1Q06520 285 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 ACSBG2Q5FVE4 666 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 PRSS36Q5K4E3 855 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 ZNF549Q6P9A3 640 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 ALYREFQ86V81 257 aaKnown RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TMEM25Q86YD3 366 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 CAMK1DQ8IU85 385 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 DNAJC9Q8WXX5 260 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 STMN2Q93045 179 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 GPR63Q9BZJ6 419 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 CDH19Q9H159 772 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SPHK2Q9NRA0 654 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TAS2R13Q9NYV9 303 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SLC25A13Q9UJS0 675 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 HS3ST2Q9Y278 367 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 F8W8V4 182 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SLCO1B7G3V0H7 640 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 NPHS1O60500 1241 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SLC4A1P02730 911 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SRCP12931 536 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SERPINA4P29622 427 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 PGM1P36871 562 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 PRKAA1Q13131 559 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 KPNB1Q14974 876 aaKnown RBP15.27■□□□□ 0.03
SF3B4-201ENST00000271628 ZRSR2Q15696 482 aaKnown RBP15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SLC5A9Q2M3M2 681 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 CFAP157Q5JU67 520 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 PIWIL4Q7Z3Z4 852 aaKnown RBP15.27■□□□□ 0.03
SF3B4-201ENST00000271628 SLC22A9Q8IVM8 553 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 PAF1Q8N7H5 531 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF781Q8N8C0 355 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 PNPLA1Q8N8W4 532 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 EBF4Q9BQW3 602 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 BBS2Q9BXC9 721 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 IL17CQ9P0M4 197 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 STX18Q9P2W9 335 aaKnown RBP15.27■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF711Q9Y462 761 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.03
SF3B4-201ENST00000271628 UBA6A0AVT1 1052 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 B2RBV5 119 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 NEDD8-MDP1E9PL57 170 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 NVLO15381 856 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 PSMG1O95456 288 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 MRPS35P82673 323 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 PFKPQ01813 784 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 SLC34A1Q06495 639 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 PDAP1Q13442 181 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 DMC1Q14565 340 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 RCN1Q15293 331 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF77Q15935 545 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 MUM1Q2TAK8 710 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 GRASPQ7Z6J2 395 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ANKRD49Q8WVL7 239 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 LPGAT1Q92604 370 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 CNDP1Q96KN2 507 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 TUBGCP5Q96RT8 1024 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 HTATIP2Q9BUP3 242 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 C1orf21Q9H246 121 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 POLR3BQ9NW08 1133 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ARMCX1Q9P291 453 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 FKBPLQ9UIM3 349 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 COMMD10Q9Y6G5 202 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 A0A0J9YYE9 177 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF195O14628 629 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 SLC9A3R1O14745 358 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ZNF821O75541 412 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 SRP72O76094 671 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 IPO13O94829 963 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 TRBC1P01850 177 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 CD9P21926 228 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 PPARGP37231 505 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 IDH3AP50213 366 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 RPL14P50914 215 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ADARP55265 1226 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 DNAL1Q4LDG9 190 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 TRIM68Q6AZZ1 485 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 RYBPQ8N488 228 aaPredicted RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 RPL10LQ96L21 214 aaKnown RBP15.26■□□□□ 0.03
SF3B4-201ENST00000271628 SMIM14Q96QK8 99 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 ZFYVE1Q9HBF4 777 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 VTI1BQ9UEU0 232 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 TAGLN3Q9UI15 199 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 HCFC2Q9Y5Z7 792 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 SLC30A1Q9Y6M5 507 aa15.26■□□□□ 0.03
SF3B4-201ENST00000271628 A6NHS1 94 aa15.25■□□□□ 0.03
SF3B4-201ENST00000271628 PYGLP06737 847 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms