RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DNAJC1Q96KC8 554 aaKnown RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 APOL4Q9BPW4 351 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 RERGLQ9H628 205 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 H3BN98 237 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 TMEM63AO94886 807 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CRATP43155 626 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 PCYT1AP49585 367 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 PSRC1Q6PGN9 363 aaPredicted RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 OLFML1Q6UWY5 402 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 GCNT7Q6ZNI0 430 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 PLEKHM3Q6ZWE6 761 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 UBE2R2Q712K3 238 aaPredicted RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF655Q8N720 491 aaPredicted RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 KCTD13Q8WZ19 329 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 LRMDAQ9H2I8 198 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 RHBGQ9H310 441 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 WDR55Q9H6Y2 383 aaPredicted RBP15.39■□□□□ 0.05
TIMP3-201ENST00000266085 CCSER2Q9H7U1 834 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 KCTD5Q9NXV2 234 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 ASB3Q9Y575 518 aa15.39■□□□□ 0.05
TIMP3-201ENST00000266085 TRIM38O00635 465 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 NMBRP28336 390 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 TLX1P31314 330 aaPredicted RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 CHRNA4P43681 627 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 PRKAG1P54619 331 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 OGDHQ02218 1023 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 GPR156Q8NFN8 814 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 AGAP11Q8TF27 550 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 SH3GL3Q99963 347 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 FAIM2Q9BWQ8 316 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 CEP44Q9C0F1 390 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 EIF2B3Q9NR50 452 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 KLHL20Q9Y2M5 609 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 C5P01031 1676 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 ARHGEF9O43307 516 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 POP4O95707 220 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 EIF2S1P05198 315 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 KRT8P05787 483 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 SPAM1P38567 509 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 QPCTQ16769 361 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 TSTD2Q5T7W7 516 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 HLA-DQA1Q5Y7H0 255 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 CTU1Q7Z7A3 348 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 SERINC5Q86VE9 423 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 ZBED3Q96IU2 234 aaPredicted RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 GPR21Q99679 349 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 FAM83DQ9H4H8 585 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 DUSP12Q9UNI6 340 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 MYH13Q9UKX3 1938 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 AGRPO00253 132 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 CACNB4O00305 520 aaPredicted RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 ZW10O43264 779 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 PRAMEF1O95521 474 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 HSMCR30P0CW71 290 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 GJA1P17302 382 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 GSSP48637 474 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 FSTL4Q6MZW2 842 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 FBXL22Q6P050 247 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF296Q8WUU4 475 aaPredicted RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 GLMNQ92990 594 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 USP7Q93009 1102 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 AP2M1Q96CW1 435 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 SMOQ99835 787 aa15.38■□□□□ 0.05
TIMP3-201ENST00000266085 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 SETD1AO15047 1707 aaKnown RBP15.38■□□□□ 0.05
TIMP3-201ENST00000266085 ISM1B1AKI9 464 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PEX1O43933 1283 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PRNPP04156 253 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 MPSTP25325 297 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ADGRF1Q5T601 910 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 TXNDC8Q6A555 127 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 TRMT10BQ6PF06 316 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CASP12Q6UXS9 341 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CHMP1BQ7LBR1 199 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CLNKQ7Z7G1 428 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ZC3H3Q8IXZ2 948 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CRYGNQ8WXF5 182 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 COL26A1Q96A83 441 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 NMUR2Q9GZQ4 415 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PCDH12Q9NPG4 1184 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 RNASEH2AO75792 299 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 FAM182AQ5T1J6 154 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ATXN7L2Q5T6C5 722 aaPredicted RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 RAVER1Q8IY67 606 aaKnown RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 BEND7Q8N7W2 519 aaPredicted RBP15.37■□□□□ 0.05
TIMP3-201ENST00000266085 SH3RF2Q8TEC5 729 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 C7orf26Q96N11 449 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 XYLT2Q9H1B5 865 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 TGDSO95455 350 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CCDC142Q17RM4 750 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 TIGD2Q4W5G0 525 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ZNF549Q6P9A3 640 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 PACS2Q86VP3 889 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 CYP4Z2PQ8N1L4 340 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 ZFP28Q8NHY6 868 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 LMO3Q8TAP4 145 aa15.37■□□□□ 0.05
TIMP3-201ENST00000266085 DTNBP1Q96EV8 351 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms