RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TXNP10599 105 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 UBA1P22314 1058 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 LRPAP1P30533 357 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 ZNF132P52740 706 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PPP5CP53041 499 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GJA9P57773 515 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MPP1Q00013 466 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HSPA14Q0VDF9 509 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PPP1R8Q12972 351 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 DMP1Q13316 513 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 CUL2Q13617 745 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HSDL1Q3SXM5 330 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 AGAP6Q5VW22 663 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 AGMOQ6ZNB7 445 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 C15orf39Q6ZRI6 1047 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 COLGALT2Q8IYK4 626 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 OR4M1Q8NGD0 313 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SPATA33Q96N06 139 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 AGAP4Q96P64 663 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 FERD3LQ96RJ6 166 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 OMDQ99983 421 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 POLR3FQ9H1D9 316 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 TOR4AQ9NXH8 423 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GMIPQ9P107 970 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 RBPJLQ9UBG7 517 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 M0R3G1 203 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 XPNPEP2O43895 674 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 EXTL3O43909 919 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 NDST3O95803 873 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HMGCRP04035 888 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HSPA1AP0DMV8 641 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 HSPA1BP0DMV9 641 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 PTGS2P35354 604 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GGT5P36269 586 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HTR3AP46098 478 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 TRAP1Q12931 704 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 TUBA3CQ13748 450 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 DGCR6Q14129 220 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PRPSAP1Q14558 356 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 DUSP7Q16829 419 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 AASDHQ4L235 1098 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 RAP1GAP2Q684P5 730 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PACRGLQ8N7B6 248 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 C7orf57Q8NEG2 295 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 OR13J1Q8NGT2 312 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 ARNTL2Q8WYA1 636 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 CENPNQ96H22 339 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 CDHR1Q96JP9 859 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 CCDC90BQ9GZT6 254 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MKRN2Q9H000 416 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 SPC25Q9HBM1 224 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 TMEM39AQ9NV64 488 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 TBC1D13Q9NVG8 400 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GIMAP2Q9UG22 337 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 AGO1Q9UL18 857 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 INVSQ9Y283 1065 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 B8ZZF3 427 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MRASO14807 208 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PLA2G6O60733 806 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MTRF1O75570 445 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 ARIH2O95376 493 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SLC4A1P02730 911 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GSNP06396 782 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 ZNF286BP0CG31 522 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 HNRNPLP14866 589 aaKnown RBP eCLIP8.76□□□□□ -1.014e-8■■■■□ 19.4
VAPB-201ENST00000265619 SAT1P21673 171 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 FASP25445 335 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MGAT1P26572 445 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 UQCRC1P31930 480 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 C1QTNF8P60827 252 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 BST2Q10589 180 aaKnown RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 PIGHQ14442 188 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 IRF3Q14653 427 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PDK2Q15119 407 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 ZFP69Q49AA0 526 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 C8orf82Q6P1X6 216 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 SYTL1Q8IYJ3 562 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PELI3Q8N2H9 469 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 FAM109AQ8N4B1 249 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 REPS2Q8NFH8 660 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 FCRL3Q96P31 734 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 SNX18Q96RF0 628 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 GAD1Q99259 594 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 SEPHS2Q99611 448 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 KCTD14Q9BQ13 255 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 C9orf16Q9BUW7 83 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 ING2Q9H160 280 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PIF1Q9H611 641 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 CD320Q9NPF0 282 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 RNF19AQ9NV58 838 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 OXSMQ9NWU1 459 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 PCDH10Q9P2E7 1040 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 UBA2Q9UBT2 640 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 RAP2CQ9Y3L5 183 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 MFHAS1Q9Y4C4 1052 aa8.76□□□□□ -1.01
VAPB-201ENST00000265619 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
VAPB-201ENST00000265619 KPNA6O60684 536 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 DAB1O75553 588 aa8.75□□□□□ -1.01
VAPB-201ENST00000265619 YWHAQP27348 245 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 244.6 ms