RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 CENPSQ8N2Z9 138 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 GBA3Q9H227 469 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 RNF39Q9H2S5 420 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 TPK1Q9H3S4 243 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 LEF1Q9UJU2 399 aaPredicted RBP17.08■□□□□ 0.32
SRF-201ENST00000265354 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 LRRC14BA6NHZ5 514 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 SOCS2O14508 198 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 IL4RP24394 825 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 DSC2Q02487 901 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 ANKDD1AQ495B1 522 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 LILRA2Q8N149 483 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 MAGED4Q96JG8 741 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 CINPQ9BW66 212 aaPredicted RBP17.08■□□□□ 0.32
SRF-201ENST00000265354 POLG2Q9UHN1 485 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 SPEF1Q9Y4P9 236 aa17.08■□□□□ 0.32
SRF-201ENST00000265354 A8MT66 165 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 K7EPI3 171 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 DDX5P17844 614 aaKnown RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 ICAM3P32942 547 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 TRAF3Q13114 568 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 CPSF6Q16630 551 aaKnown RBP eCLIP17.07■□□□□ 0.32
SRF-201ENST00000265354 RAP1GAP2Q684P5 730 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 ANKRD46Q86W74 232 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 TEKT5Q96M29 485 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 STYXL1Q9Y6J8 313 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 PIGRP01833 764 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 EFNA1P20827 205 aaPredicted RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 ATP6V1E1P36543 226 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 BRCC3P46736 316 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 RUNX1T1Q06455 604 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 TRNP1Q6NT89 227 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 TIFABQ6ZNK6 161 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 UGT2B28Q9BY64 529 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 FAM32AQ9Y421 112 aaKnown RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 PAGE1O75459 146 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 PPP3CCP48454 512 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 DIO3P55073 304 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 GATAD2AQ86YP4 633 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 CEP97Q8IW35 865 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 PNPT1Q8TCS8 783 aaKnown RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 UBASH3BQ8TF42 649 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 AASDHPPTQ9NRN7 309 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 IPPQ9Y573 584 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 GOLGB1Q14789 3259 aaKnown RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 TYW5A2RUC4 315 aaKnown RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 XPAP23025 273 aaPredicted RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 HALP42357 657 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 CLCN5P51795 746 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 ARMC4Q5T2S8 1044 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 IQSEC1Q6DN90 963 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 TBC1D21Q8IYX1 336 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 SCAIQ8N9R8 606 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 OR56A4Q8NGH8 313 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 OR10A6Q8NH74 314 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 PCYT2Q99447 389 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
SRF-201ENST00000265354 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
SRF-201ENST00000265354 CYP7B1O75881 506 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 DGKQP52824 942 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SNAPC2Q13487 334 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 OVOS1Q6IE37 1185 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SNX29P2Q8IUI4 249 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 CFAP52Q8N1V2 620 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 FNDC8Q8TC99 324 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 HOPXQ9BPY8 73 aaPredicted RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 KCTD3Q9Y597 815 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 LAMB4A4D0S4 1761 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 TJP1Q07157 1748 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 TNPO2O14787 897 aaKnown RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 AURKAO14965 403 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 TSPAN1O60635 241 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 THRBP10828 461 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SYT16Q17RD7 645 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 MAVSQ7Z434 540 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 GLT6D1Q7Z4J2 308 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 THAP5Q7Z6K1 395 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 MUS81Q96NY9 551 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 TSEN34Q9BSV6 310 aaKnown RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 SMOXQ9NWM0 555 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 GMPPBQ9Y5P6 360 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 PDZK1P1A8MUH7 402 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 CCRL2O00421 344 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 SDHDO14521 159 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 ARPC2O15144 300 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 CDH5P33151 784 aaPredicted RBP17.06■□□□□ 0.32
SRF-201ENST00000265354 CAPGP40121 348 aa17.06■□□□□ 0.32
SRF-201ENST00000265354 TSNQ15631 228 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms