RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CRADDP78560 199 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CDKN3Q16667 212 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 P3H1Q32P28 736 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PSAPL1Q6NUJ1 521 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PARGQ86W56 976 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CCHCR1Q8TD31 782 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 NETO1Q8TDF5 533 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 SKA1Q96BD8 255 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 RTP4Q96DX8 246 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 APOOQ9BUR5 198 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 SPATA16Q9BXB7 569 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 RPL26L1Q9UNX3 145 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZKSCAN5Q9Y2L8 839 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 TMEM98Q9Y2Y6 226 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 AAR2Q9Y312 384 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PPIL1Q9Y3C6 166 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PRKAB1Q9Y478 270 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZFHX4Q86UP3 3567 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 UNC13CQ8NB66 2214 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PLXNB3Q9ULL4 1909 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 GOLGA6L10A0A0M3HER8 536 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 TCRBV7S3A2A0A539 114 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 GOLGA8MH3BSY2 632 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 AP2A1O95782 977 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CD59P13987 128 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZNF30P17039 623 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 BPIP17213 487 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 JUNDP17535 347 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 HLA-DPA1P20036 260 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 EPHA8P29322 1005 aaPredicted RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 NUDT1P36639 197 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 SPINT3P49223 89 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ARRB1P49407 418 aaPredicted RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CDK3Q00526 305 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 GPS1Q13098 491 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 EIF2B5Q13144 721 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PARP6Q2NL67 630 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PRRT3Q5FWE3 981 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PAPD7Q5XG87 772 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 KCTD11Q693B1 232 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 DENND5AQ6IQ26 1287 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ESRP1Q6NXG1 681 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PNCKQ6P2M8 343 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 TECPR1Q7Z6L1 1165 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 SFTPA2Q8IWL1 248 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 GPR161Q8N6U8 529 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 DNAAF3Q8N9W5 541 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 OR13C4Q8NGS5 318 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ACTRT1Q8TDG2 376 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 MAIP1Q8WWC4 291 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 LYSMD1Q96S90 227 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 CYP4F12Q9HCS2 524 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PKD2L2Q9NZM6 624 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 APOBEC3BQ9UH17 382 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 PCYT1BQ9Y5K3 369 aaPredicted RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 EPG5Q9HCE0 2579 aa7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 MAP1BP46821 2468 aaKnown RBP7.22□□□□□ -1.25
DEPDC1B-201ENST00000265036 ZNF106Q9H2Y7 1883 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 A0A1B0GTQ1 180 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 SPAARA0A1B0GVQ0 90 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CACNB4O00305 520 aaPredicted RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 PHF2O75151 1096 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 ASMTLO95671 621 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 KRT14P02533 472 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CASQ1P31415 396 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 STIP1P31948 543 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CA5AP35218 305 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 COILP38432 576 aaPredicted RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 NOVA1P51513 510 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 SESN2P58004 480 aaPredicted RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 NFATC4Q14934 902 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 ALG11Q2TAA5 492 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 DEFB133Q30KQ1 61 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CERCAMQ5T4B2 595 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 ANKRD22Q5VYY1 191 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 IL27RAQ6UWB1 636 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 RANBP10Q6VN20 620 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 MACC1Q6ZN28 852 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 IQCHQ86VS3 1027 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 NAXDQ8IW45 347 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 TTC30BQ8N4P2 665 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 EID2Q8N6I1 236 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 OR4K2Q8NGD2 314 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CCL4L1Q8NHW4 92 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 OR1E3Q8WZA6 343 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 CCDC97Q96F63 343 aaPredicted RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 DNAJC1Q96KC8 554 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 TRIM56Q9BRZ2 755 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 TRIM51Q9BSJ1 452 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 LRRC61Q9BV99 259 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 FAM83DQ9H4H8 585 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 LRRC40Q9H9A6 602 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 MAGEE1Q9HCI5 957 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 KLQ9UEF7 1012 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 FKBPLQ9UIM3 349 aa7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 TPX2Q9ULW0 747 aaKnown RBP7.21□□□□□ -1.25
DEPDC1B-201ENST00000265036 HS3ST3A1Q9Y663 406 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms