RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 STAT5AP42229 794 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 RIPK1Q13546 671 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 POMZP3Q6PJE2 187 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 FAM220AQ7Z4H9 259 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 GHDCQ8N2G8 530 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TAMM41Q96BW9 452 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 Q96MT0 163 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CDT1Q9H211 546 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TIMMDC1Q9NPL8 285 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 RAB26Q9ULW5 256 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 RWDD3Q9Y3V2 267 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ABHD14A-ACY1A0A1B0GW23 586 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 LRIG2O94898 1065 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 IFNA16P05015 189 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 ZNF670Q9BS34 389 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 C11orf16Q9NQ32 467 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FAM240BA0A1B0GVZ2 78 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 PTPN3P26045 913 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 SLC26A2P50443 739 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 CDH15P55291 814 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 TAS2R41P59536 307 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 LIPEQ05469 1076 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 GRM3Q14832 879 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 HLA-DQA1Q5Y7H0 255 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FAM171BQ6P995 826 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 USP45Q70EL2 814 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 THAP5Q7Z6K1 395 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 DAW1Q8N136 415 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 ZNF433Q8N7K0 673 aaPredicted RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 FAM98AQ8NCA5 519 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 GTPBP3Q969Y2 492 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 GAL3ST1Q99999 423 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 CHIAQ9BZP6 476 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 RAB25P57735 213 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 HECTD2Q5U5R9 776 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 STX12Q86Y82 276 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 MFSD3Q96ES6 412 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 MFHAS1Q9Y4C4 1052 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 MAP4K5Q9Y4K4 846 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FAM47E-STBD1D6RA91 191 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 PDHXO00330 501 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 OTCP00480 354 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 SLC6A2P23975 617 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FMO3P31513 532 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 HNRNPH3P31942 346 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 NRLP54845 237 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 HSF2Q03933 536 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.04□□□□□ -0.484e-8■■■■□ 21.6
SMG6-201ENST00000263073 RNASEH2BQ5TBB1 312 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 SULT1C3Q6IMI6 304 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 ERICH5Q6P6B1 374 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 TRIM74Q86UV6 250 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 TRIM73Q86UV7 250 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 IQCF2Q8IXL9 164 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 CPSF7Q8N684 471 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 C11orf24Q96F05 449 aaPredicted RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 APOLD1Q96LR9 279 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 ADAM2Q99965 735 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 AARSD1Q9BTE6 412 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 ADAMTS13Q76LX8 1427 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 A0A075B6Q4 140 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 MDM4O15151 490 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 RGS10O43665 173 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 SGTAO43765 313 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 ALOX5P09917 674 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 KLRC2P26717 231 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 CAPGP40121 348 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 FCGRTP55899 365 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 IRF9Q00978 393 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 EIF2B5Q13144 721 aaKnown RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 PPM1LQ5SGD2 360 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 LIN54Q6MZP7 749 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 ZNF655Q8N720 491 aaPredicted RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 SPATA22Q8NHS9 363 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 C18orf25Q96B23 403 aaPredicted RBP12.04□□□□□ -0.48
SMG6-201ENST00000263073 MCMBPQ9BTE3 642 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 EBPLQ9BY08 206 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 BRD9Q9H8M2 597 aa12.04□□□□□ -0.48
SMG6-201ENST00000263073 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 ANGPTL1O95841 491 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 THRBP10828 461 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 MTHFD1P11586 935 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 RPS9P46781 194 aaKnown RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 RAET1GQ6H3X3 334 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 BHLHB9Q6PI77 547 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 RAB43Q86YS6 212 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 SUN5Q8TC36 379 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 DNAJC28Q9NX36 388 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
SMG6-201ENST00000263073 RAPGEFL1Q9UHV5 662 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 KPNA6O60684 536 aa12.03□□□□□ -0.48
SMG6-201ENST00000263073 PTPRAP18433 802 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms