RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CAMKK2Q96RR4 588 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 NPY6RQ99463 290 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 NFKBIZQ9BYH8 718 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 MUC13Q9H3R2 512 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 GSTO2Q9H4Y5 243 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 ATP13A3Q9H7F0 1226 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
XRCC1-201ENST00000262887 MSI1O43347 362 aaKnown RBP14.96□□□□□ -0.02
XRCC1-201ENST00000262887 UMPSP11172 480 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 FAM209AQ5JX71 171 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 PLEKHG7Q6ZR37 379 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 PLPPR4Q7Z2D5 763 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 ITIH5Q86UX2 942 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 MIER2Q8N344 545 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 SGCDQ92629 289 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 VMP1Q96GC9 406 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 VAT1Q99536 393 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 SLC30A3Q99726 388 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 BDH2Q9BUT1 245 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 ALG2Q9H553 416 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 RMND5AQ9H871 391 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.96□□□□□ -0.02
XRCC1-201ENST00000262887 ENPP5Q9UJA9 477 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 V9GYQ6 96 aa14.96□□□□□ -0.02
XRCC1-201ENST00000262887 ARIH2O95376 493 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 ARNTP27540 789 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 HTR1BP28222 390 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SPATS1Q496A3 300 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 RBM20Q5T481 1227 aaKnown RBP14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SYPL2Q5VXT5 272 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 OTOP3Q7RTS5 596 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 THAP5Q7Z6K1 395 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SLC22A9Q8IVM8 553 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 PPHLN1Q8NEY8 458 aaKnown RBP14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SPATA22Q8NHS9 363 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 WNT8BQ93098 351 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SEPHS2Q99611 448 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 HPS4Q9NQG7 708 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 GIMAP2Q9UG22 337 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SLC2A6Q9UGQ3 507 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 PCDHA9Q9Y5H5 950 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 TOR1BO14657 336 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 AURKAO14965 403 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 UGT2B11O75310 529 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 RBP1P09455 135 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 LTA4HP09960 611 aaKnown RBP14.95□□□□□ -0.02
XRCC1-201ENST00000262887 GSK3BP49841 420 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 GEN1Q17RS7 908 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 UGT3A2Q3SY77 523 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 ANKK1Q8NFD2 765 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 DNAJB14Q8TBM8 379 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 SH3GL1Q99961 368 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 KCTD14Q9BQ13 255 aaPredicted RBP14.95□□□□□ -0.02
XRCC1-201ENST00000262887 TRMOQ9BU70 441 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 CEP44Q9C0F1 390 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 FBXO5Q9UKT4 447 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 BAG5Q9UL15 447 aa14.95□□□□□ -0.02
XRCC1-201ENST00000262887 ANKRD34BA5PLL1 514 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TNFRSF10AO00220 468 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 PEX10O60683 326 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TCEA1P23193 301 aaKnown RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 LMO2P25791 158 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 ADRA1BP35368 520 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TAF2Q6P1X5 1199 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 C2CD4AQ8NCU7 369 aaPredicted RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 SMG8Q8ND04 991 aaKnown RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 SLC22A17Q8WUG5 538 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 IFT52Q9Y366 437 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 PCDHGA11Q9Y5H2 935 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 SCN1AP35498 2009 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 XYLBO75191 536 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 IL7RP16871 459 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 FOXM1Q08050 763 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TIGD2Q4W5G0 525 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 RABL3Q5HYI8 236 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 LINC00299Q6ZSB3 139 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 C8orf59Q8N0T1 100 aaPredicted RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 IPMKQ8NFU5 416 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 HDAC2Q92769 488 aaKnown RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TMEM125Q96AQ2 219 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 BTN2A3PQ96KV6 586 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TBL1YQ9BQ87 522 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 HOXC10Q9NYD6 342 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 AKT3Q9Y243 479 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 ITM2BQ9Y287 266 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 TMA7Q9Y2S6 64 aaKnown RBP14.94□□□□□ -0.02
XRCC1-201ENST00000262887 PTGDR2Q9Y5Y4 395 aa14.94□□□□□ -0.02
XRCC1-201ENST00000262887 SOWAHBA6NEL2 793 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 A8MU76 341 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 HBP1O60381 514 aa14.93□□□□□ -0.02
XRCC1-201ENST00000262887 DEAF1O75398 565 aaPredicted RBP14.93□□□□□ -0.02
XRCC1-201ENST00000262887 MT-CYBP00156 380 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms