RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PTPN18Q99952 460 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 IFT80Q9P2H3 777 aaPredicted RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 GALPQ9UBC7 116 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 VTI1BQ9UEU0 232 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 FBXW11Q9UKB1 542 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 ZNF232Q9UNY5 417 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SUPT3HB4E1H0 165 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 FXYD1O00168 92 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SOAT2O75908 522 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 CDK14O94921 469 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 B3GALT4O96024 378 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SETSIPP0DME0 302 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SLC6A2P23975 617 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 RCVRNP35243 200 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 HSPA13P48723 471 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SPIDRQ14159 915 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 MEP1AQ16819 746 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 GALNT10Q86SR1 603 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 TBC1D23Q9NUY8 699 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 TMLHEQ9NVH6 421 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 TMEM181Q9P2C4 612 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 FUOMA2VDF0 154 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 HAPLN1P10915 354 aaPredicted RBP12.96□□□□□ -0.33
SNX1-201ENST00000261889 GSK3BP49841 420 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 CCNA1P78396 465 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 UNC50Q53HI1 259 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 SGO1Q5FBB7 561 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 CCDC81Q6ZN84 652 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 MIB1Q86YT6 1006 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 SCN4BQ8IWT1 228 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 CLHC1Q8NHS4 586 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 MRGPRX2Q96LB1 330 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 SENP8Q96LD8 212 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 CSF3RQ99062 836 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 GPATCH1Q9BRR8 931 aaKnown RBP12.96□□□□□ -0.33
SNX1-201ENST00000261889 SLC25A23Q9BV35 468 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 MARCH7Q9H992 704 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 RGS18Q9NS28 235 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 SLC8A2Q9UPR5 921 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 TCAF1Q9Y4C2 921 aa12.96□□□□□ -0.33
SNX1-201ENST00000261889 A0A087WXM4 84 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 XPNPEP2O43895 674 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 PAGE1O75459 146 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 MASP1P48740 699 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 CREB5Q02930 508 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 LIPEQ05469 1076 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 SEMA3AQ14563 771 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 C6orf183Q5T699 404 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 GALNT5Q7Z7M9 940 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 DHRSXQ8N5I4 330 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 TMCO5AQ8N6Q1 288 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 BRI3BPQ8WY22 251 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 ISL2Q96A47 359 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 KIFC1Q9BW19 673 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 GLOD4Q9HC38 313 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 FAIMQ9NVQ4 179 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 MIOSQ9NXC5 875 aa12.96□□□□□ -0.34
SNX1-201ENST00000261889 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.34
SNX1-201ENST00000261889 IQCF5A8MTL0 148 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 GAS2O43903 313 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 LTA4HP09960 611 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 SMPD1P17405 629 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 IL10P22301 178 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 GPX3P22352 226 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 NPY2RP49146 381 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 RAD23AP54725 363 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 RELAQ04206 551 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ANKRD26P1Q6NSI1 321 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 LSRQ86X29 649 aaPredicted RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 ZDHHC17Q8IUH5 632 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ADGRG5Q8IZF4 528 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 DQX1Q8TE96 717 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 FIG4Q92562 907 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 TNIP3Q96KP6 325 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 HSFY1Q96LI6 401 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 KCTD14Q9BQ13 255 aaPredicted RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 LHPPQ9H008 270 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 IPPQ9Y573 584 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ADSLP30566 484 aaPredicted RBP12.95□□□□□ -0.34
SNX1-201ENST00000261889 SNX16P57768 344 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 NAB1Q13506 487 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 ZBED5Q49AG3 693 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 DCDC5Q6ZRR9 648 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 CDYL2Q8N8U2 506 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 DDHD1Q8NEL9 900 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 SLC30A3Q99726 388 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 MCMBPQ9BTE3 642 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 POLG2Q9UHN1 485 aa12.95□□□□□ -0.34
SNX1-201ENST00000261889 SPEGQ15772 3267 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms