RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NDUFS3O75489 264 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 WISP3O95389 354 aaPredicted RBP22.3■■□□□ 1.16
SIX3-201ENST00000260653 MYL2P10916 166 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 ARRB2P32121 409 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 RAD51Q06609 339 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 PTPRNQ16849 979 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 TSNAXIP1Q2TAA8 658 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 ATG14Q6ZNE5 492 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 UBXN10Q96LJ8 280 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 FAM83CQ9BQN1 747 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 AARSD1Q9BTE6 412 aaKnown RBP22.3■■□□□ 1.16
SIX3-201ENST00000260653 MARCOQ9UEW3 520 aaPredicted RBP22.3■■□□□ 1.16
SIX3-201ENST00000260653 USH1CQ9Y6N9 552 aa22.3■■□□□ 1.16
SIX3-201ENST00000260653 DLDP09622 509 aaKnown RBP22.29■■□□□ 1.16
SIX3-201ENST00000260653 SLC6A11P48066 632 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 SLC1A6P48664 564 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 LRRC73Q5JTD7 316 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 ZYG11AQ6WRX3 759 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 NAPRTQ6XQN6 538 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 TCF12Q99081 682 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 TRPV4Q9HBA0 871 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 OR1I1O60431 355 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 FMO4P31512 558 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 RECQLP46063 649 aaPredicted RBP22.29■■□□□ 1.16
SIX3-201ENST00000260653 FAM151BQ6UXP7 276 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 FITM2Q8N6M3 262 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 ZNF366Q8N895 744 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 OR6Y1Q8NGX8 325 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 RDH11Q8TC12 318 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 SCG3Q8WXD2 468 aaKnown RBP22.29■■□□□ 1.16
SIX3-201ENST00000260653 ZNF641Q96N77 438 aaPredicted RBP22.29■■□□□ 1.16
SIX3-201ENST00000260653 KCNK13Q9HB14 408 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 MID2Q9UJV3 735 aa22.29■■□□□ 1.16
SIX3-201ENST00000260653 GAPDHSO14556 408 aaPredicted RBP22.28■■□□□ 1.16
SIX3-201ENST00000260653 LTA4HP09960 611 aaKnown RBP22.28■■□□□ 1.16
SIX3-201ENST00000260653 KITP10721 976 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 NNMTP40261 264 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 FAM83EQ2M2I3 478 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 VITQ6UXI7 678 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 CRLF3Q8IUI8 442 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 NXPE3Q969Y0 559 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 SCRN2Q96FV2 425 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 KLHL32Q96NJ5 620 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 LYSMD1Q96S90 227 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 MRPL46Q9H2W6 279 aaKnown RBP22.28■■□□□ 1.16
SIX3-201ENST00000260653 ECT2Q9H8V3 914 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 HPS4Q9NQG7 708 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 OXSMQ9NWU1 459 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 CDH7Q9ULB5 785 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 SLC27A6Q9Y2P4 619 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 WASH3PC4AMC7 463 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 GRK2P25098 689 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 TTPAP49638 278 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 CRTC1Q6UUV9 634 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 TAS2R42Q7RTR8 314 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 MED16Q9Y2X0 877 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 SLC30A1Q9Y6M5 507 aa22.28■■□□□ 1.16
SIX3-201ENST00000260653 TRIM13O60858 407 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 SRP72O76094 671 aaKnown RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 PRAMEF1O95521 474 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 ATP5BP06576 529 aaKnown RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 HOXB8P17481 243 aaPredicted RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 ILF2Q12905 390 aaKnown RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 AGAP9Q5VTM2 703 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 GDPD4Q6W3E5 623 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 USP45Q70EL2 814 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 PLPP6Q8IY26 295 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 ZNF398Q8TD17 642 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 WFIKKN2Q8TEU8 576 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 MOCOSQ96EN8 888 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 SGF29Q96ES7 293 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 BIRC8Q96P09 236 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 SORT1Q99523 831 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 MRPL57Q9BQC6 102 aaKnown RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 KDM4CQ9H3R0 1056 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 ZFP14Q9HCL3 533 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 ACSS2Q9NR19 701 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 OBP2AQ9NY56 170 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 WASF2Q9Y6W5 498 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 KIF26AQ9ULI4 1882 aaPredicted RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 PRRT4C9JH25 899 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 BPIP17213 487 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 CACNG1Q06432 222 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 TECRLQ5HYJ1 363 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 LRRC66Q68CR7 880 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 TDHQ8IZJ6 230 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 MCCC1Q96RQ3 725 aaPredicted RBP22.27■■□□□ 1.16
SIX3-201ENST00000260653 HEPHQ9BQS7 1158 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 TMEM120AQ9BXJ8 343 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 FAM50BQ9Y247 325 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 PPIL1Q9Y3C6 166 aa22.27■■□□□ 1.16
SIX3-201ENST00000260653 ZNF106Q9H2Y7 1883 aaKnown RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 LHCGRP22888 699 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 SUOXP51687 545 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 KPNA2P52292 529 aaKnown RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 KDSRQ06136 332 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 NAIF1Q69YI7 327 aaPredicted RBP22.26■■□□□ 1.15
SIX3-201ENST00000260653 TPRG1Q6ZUI0 275 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 CCDC68Q9H2F9 335 aa22.26■■□□□ 1.15
SIX3-201ENST00000260653 IL26Q9NPH9 171 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms