RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LNPEPQ9UIQ6 1025 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 HAO1Q9UJM8 370 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 MTCH2Q9Y6C9 303 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 FSHRP23945 695 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 MC4RP32245 332 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 DGKKQ5KSL6 1271 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 GET4Q7L5D6 327 aaPredicted RBP27.6■■■□□ 2.01
CCM2-201ENST00000258781 OR6K2Q8NGY2 324 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 ANKRD49Q8WVL7 239 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 FGF13Q92913 245 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 LRRC3BQ96PB8 259 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 BBS2Q9BXC9 721 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 NMUR2Q9GZQ4 415 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 SPHK2Q9NRA0 654 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 LMCD1Q9NZU5 365 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 IL17CQ9P0M4 197 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 RAP2CQ9Y3L5 183 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 PKP3Q9Y446 797 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 ZNF106Q9H2Y7 1883 aaKnown RBP27.6■■■□□ 2.01
CCM2-201ENST00000258781 SCN8AQ9UQD0 1980 aa27.6■■■□□ 2.01
CCM2-201ENST00000258781 A0A1W2PPC1 479 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 ZNF195O14628 629 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 NDUFS3O75489 264 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 SNUPNO95149 360 aaKnown RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 CBX6O95503 412 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 PRSS56P0CW18 603 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 HMGCLP35914 325 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 TTPAP49638 278 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 SNRPD1P62314 119 aaKnown RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 TIAL1Q01085 375 aaKnown RBP eCLIP27.59■■■□□ 2.01
CCM2-201ENST00000258781 AARS2Q5JTZ9 985 aaKnown RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 TMEM207Q6UWW9 146 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 RILPQ96NA2 401 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 GPR63Q9BZJ6 419 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 ILKAPQ9H0C8 392 aaPredicted RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 SLC25A13Q9UJS0 675 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 TRIM33Q9UPN9 1127 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 NEDD8-MDP1E9PL57 170 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 NPHS1O60500 1241 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 PIGNO95427 931 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 SERPINB5P36952 375 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 CTSOP43234 321 aaPredicted RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 NAGLUP54802 743 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 DMC1Q14565 340 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 MAVSQ7Z434 540 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 PIM3Q86V86 326 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 ZNF781Q8N8C0 355 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 TXNDC5Q8NBS9 432 aaKnown RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 RSPRY1Q96DX4 576 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 EBF4Q9BQW3 602 aa27.59■■■□□ 2.01
CCM2-201ENST00000258781 UNKQ9C0B0 810 aaKnown RBP27.59■■■□□ 2.01
CCM2-201ENST00000258781 SERPINA6P08185 405 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 SERPINA4P29622 427 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 KCNJ2P63252 427 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 MLLT1Q03111 559 aaPredicted RBP27.58■■■□□ 2.01
CCM2-201ENST00000258781 TUBB3Q13509 450 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 PEX6Q13608 980 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 FBXW10Q5XX13 1052 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 ASTLQ6HA08 431 aaPredicted RBP27.58■■■□□ 2.01
CCM2-201ENST00000258781 C22orf39Q6P5X5 142 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 PIWIL4Q7Z3Z4 852 aaKnown RBP27.58■■■□□ 2.01
CCM2-201ENST00000258781 TTC7BQ86TV6 843 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 PRR11Q96HE9 360 aaPredicted RBP27.58■■■□□ 2.01
CCM2-201ENST00000258781 TUBGCP5Q96RT8 1024 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 CEP44Q9C0F1 390 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 CCDC68Q9H2F9 335 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 TNKS2Q9H2K2 1166 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 MARK1Q9P0L2 795 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 SORCS3Q9UPU3 1222 aa27.58■■■□□ 2.01
CCM2-201ENST00000258781 A0A0J9YYE9 177 aa27.57■■■□□ 2
CCM2-201ENST00000258781 UBA6A0AVT1 1052 aaPredicted RBP27.57■■■□□ 2
CCM2-201ENST00000258781 SOX1O00570 391 aaPredicted RBP27.57■■■□□ 2
CCM2-201ENST00000258781 TRBC1P01850 177 aa27.57■■■□□ 2
CCM2-201ENST00000258781 PABPC1P11940 636 aaKnown RBP27.57■■■□□ 2
CCM2-201ENST00000258781 CTPS1P17812 591 aa27.57■■■□□ 2
CCM2-201ENST00000258781 SULT2A1Q06520 285 aa27.57■■■□□ 2
CCM2-201ENST00000258781 PRKAA1Q13131 559 aa27.57■■■□□ 2
CCM2-201ENST00000258781 PTPRRQ15256 657 aa27.57■■■□□ 2
CCM2-201ENST00000258781 TBCCQ15814 346 aa27.57■■■□□ 2
CCM2-201ENST00000258781 LYSMD3Q7Z3D4 306 aa27.57■■■□□ 2
CCM2-201ENST00000258781 SLC7A6OSQ96CW6 309 aaPredicted RBP27.57■■■□□ 2
CCM2-201ENST00000258781 PTCD3Q96EY7 689 aaKnown RBP27.57■■■□□ 2
CCM2-201ENST00000258781 NSL1Q96IY1 281 aa27.57■■■□□ 2
CCM2-201ENST00000258781 TMEM237Q96Q45 408 aa27.57■■■□□ 2
CCM2-201ENST00000258781 LINC00597Q9H2U6 94 aa27.57■■■□□ 2
CCM2-201ENST00000258781 BPIFA1Q9NP55 256 aa27.57■■■□□ 2
CCM2-201ENST00000258781 ARL8BQ9NVJ2 186 aa27.57■■■□□ 2
CCM2-201ENST00000258781 APOBEC2Q9Y235 224 aaKnown RBP27.57■■■□□ 2
CCM2-201ENST00000258781 VIPR2P41587 438 aa27.57■■■□□ 2
CCM2-201ENST00000258781 STK19P49842 368 aaPredicted RBP27.57■■■□□ 2
CCM2-201ENST00000258781 IDH3AP50213 366 aa27.57■■■□□ 2
CCM2-201ENST00000258781 FAM78AQ5JUQ0 283 aa27.57■■■□□ 2
CCM2-201ENST00000258781 KIF2BQ8N4N8 673 aa27.57■■■□□ 2
CCM2-201ENST00000258781 ST13P5Q8NFI4 369 aaPredicted RBP27.57■■■□□ 2
CCM2-201ENST00000258781 RPL10LQ96L21 214 aaKnown RBP27.57■■■□□ 2
CCM2-201ENST00000258781 POMKQ9H5K3 350 aa27.57■■■□□ 2
CCM2-201ENST00000258781 F8W8V4 182 aa27.56■■■□□ 2
CCM2-201ENST00000258781 SLC9A3R1O14745 358 aaPredicted RBP27.56■■■□□ 2
CCM2-201ENST00000258781 SRP72O76094 671 aaKnown RBP27.56■■■□□ 2
CCM2-201ENST00000258781 ALPIP09923 528 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms