RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ZIK1Q3SY52 487 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CYP4F22Q6NT55 531 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TTC27Q6P3X3 843 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CLNKQ7Z7G1 428 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TRABD2AQ86V40 505 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PDPRQ8NCN5 879 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CHST13Q8NET6 341 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 RNASE11Q8TAA1 199 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 WASF1Q92558 559 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MAGEB18Q96M61 343 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 SMAD5Q99717 465 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CDC6Q99741 560 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NPAS1Q99742 590 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ILKAPQ9H0C8 392 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 RNPEPQ9H4A4 650 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 MRPS30Q9NP92 439 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 NIT2Q9NQR4 276 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ARHGEF4Q9NR80 690 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TOPORSQ9NS56 1045 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CCM2LQ9NUG4 571 aaPredicted RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 TMLHEQ9NVH6 421 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 SMOXQ9NWM0 555 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 WARS2Q9UGM6 360 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 ADAMTS6Q9UKP5 1117 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 INPP5FQ9Y2H2 1132 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PLLPQ9Y342 182 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGB6Q9Y5F9 930 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGB2Q9Y5G2 931 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGA7Q9Y5G6 932 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGA6Q9Y5G7 932 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 PCDHGA5Q9Y5G8 931 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 AUP1Q9Y679 476 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 HSPE1-MOB4S4R3N1 261 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 DIP2AQ14689 1571 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 CHD2O14647 1828 aaKnown RBP7.74□□□□□ -1.17
GPNMB-201ENST00000258733 RGPD1P0DJD0 1748 aa7.74□□□□□ -1.17
GPNMB-201ENST00000258733 A0A0B4J269 797 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TEX13CA0A0J9YWL9 993 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 LOC100506127A0A0U1RQW1 187 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 BCLAF3A2AJT9 711 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GSAPA4D1B5 854 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CAPN5O15484 640 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 HCRTR2O43614 444 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 JAK2O60674 1132 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CST8O60676 142 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DEAF1O75398 565 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PRKD3O94806 890 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF806P0C7X5 589 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 LAP3P28838 519 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 FMO4P31512 558 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 OPRL1P41146 370 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SYKP43405 635 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CLCN5P51795 746 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ABCE1P61221 599 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PDZK1Q5T2W1 519 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ANKS3Q6ZW76 656 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GPAT4Q86UL3 456 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GPR65Q8IYL9 337 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PPM1KQ8N3J5 372 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 OR8J2Q8NGG1 315 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 BRI3BPQ8WY22 251 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 HTRA1Q92743 480 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PTCD3Q96EY7 689 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SH3YL1Q96HL8 342 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 KLHL15Q96M94 604 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ZDHHC15Q96MV8 337 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 QKIQ96PU8 341 aaKnown RBP eCLIP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 WDR77Q9BQA1 342 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TTYH2Q9BSA4 534 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 SOX7Q9BT81 388 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TBCDQ9BTW9 1192 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GPR63Q9BZJ6 419 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NEUROG2Q9H2A3 272 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 C17orf75Q9HAS0 396 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 C19orf12Q9NSK7 152 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 IMPAD1Q9NX62 359 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ACTR10Q9NZ32 417 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 NPAP1Q9NZP6 1156 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GPN3Q9UHW5 284 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 ACSL5Q9ULC5 683 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PTCH1Q13635 1447 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 COL16A1Q07092 1604 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 A0A1B0GTW7 788 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PIPSLA2A3N6 862 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 BTBD18B2RXH4 712 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 K7ERQ8 282 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PPEF2O14830 753 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 CPNE3O75131 537 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 BCL10O95999 233 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DARSP14868 501 aaKnown RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 DCKP27707 260 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 FOXN2P32314 431 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 AFMP43652 599 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 GBX2P52951 348 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-201ENST00000258733 TNNC1P63316 161 aa7.73□□□□□ -1.17
GPNMB-201ENST00000258733 PRKCZQ05513 592 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms