RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PANX3Q96QZ0 392 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 IL12RB2Q99665 862 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 RRN3Q9NYV6 651 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 SCHIP1Q9P0W5 487 aaPredicted RBP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 ZNF180Q9UJW8 692 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 IKZF3Q9UKT9 509 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CFAP20Q9Y6A4 193 aaKnown RBP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 LRRC37A2A6NM11 1700 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 SYN3O14994 580 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 MMP2P08253 660 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 COX4I1P13073 169 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NCK1P16333 377 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 EPCAMP16422 314 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 PIK3R1P27986 724 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 UGP2Q16851 508 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ADGRF1Q5T601 910 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 LIPMQ5VYY2 423 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ANGPTL8Q6UXH0 198 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 FAM110BQ8TC76 370 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 IRGQQ8WZA9 623 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 DPF3Q92784 378 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 IMP4Q96G21 291 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 VAT1Q99536 393 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 SEPHS2Q99611 448 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 LRMDAQ9H2I8 198 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CAAP1Q9H8G2 361 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 RNPEPL1Q9HAU8 725 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 TRMT6Q9UJA5 497 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 INSL5Q9Y5Q6 135 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 PTPRZ1P23471 2315 aaPredicted RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 SCN4AP35499 1836 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 LTA4HP09960 611 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ITPKAP23677 461 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CCR2P41597 374 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NEK2P51955 445 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 HMGCS1Q01581 520 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 MESP2Q0VG99 397 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CYTH1Q15438 398 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 MSANTD2Q6P1R3 559 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 IYDQ6PHW0 289 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 LZTR1Q8N653 840 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 OR52B6Q8NGF0 335 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 GANCQ8TET4 914 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 KCNN1Q92952 543 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 TRIM43Q96BQ3 446 aaPredicted RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 FAXDC2Q96IV6 333 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ZNF570Q96NI8 536 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NRTNQ99748 197 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NMRK1Q9NWW6 199 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 SPG21Q9NZD8 308 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 APPL1Q9UKG1 709 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 USP22Q9UPT9 525 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NEU3Q9UQ49 428 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ALPK2Q86TB3 2170 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 LDB2O43679 373 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 OR4F21O95013 312 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 GSNP06396 782 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 HGFP14210 728 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 XRCC1P18887 633 aaPredicted RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 PEX2P28328 305 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ARCN1P48444 511 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 THOP1P52888 689 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 METAP1P53582 386 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 YBX1P67809 324 aaKnown RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ARF5P84085 180 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 FLOT2Q14254 428 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 GRB7Q14451 532 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ZNF549Q6P9A3 640 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 ANKRD46Q86W74 232 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 RALGPS2Q86X27 583 aaPredicted RBP9.07□□□□□ -0.96
CKAP2-201ENST00000258607 FBXO39Q8N4B4 442 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 SLC39A13Q96H72 371 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 GPR22Q99680 433 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 NDE1Q9NXR1 346 aa9.07□□□□□ -0.96
CKAP2-201ENST00000258607 CACNA1EQ15878 2313 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 PIP5K1BO14986 540 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 HDAC3O15379 428 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 NVLO15381 856 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 LATO43561 262 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 AKAP10O43572 662 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SMIM24O75264 130 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 SBK3P0C264 359 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 HMGA1P17096 107 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 RPL10P27635 214 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 MAPK10P53779 464 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 BCL2L1Q07817 233 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 FASTKQ14296 549 aaKnown RBP9.06□□□□□ -0.96
CKAP2-201ENST00000258607 TIGD2Q4W5G0 525 aa9.06□□□□□ -0.96
CKAP2-201ENST00000258607 POTEHQ6S545 545 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms