RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 PTPRNQ16849 979 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 CCDC153Q494R4 210 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 ZRANB3Q5FWF4 1079 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 SDCCAG8Q86SQ7 713 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 MTDHQ86UE4 582 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 TSPAN33Q86UF1 283 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 PIANPQ8IYJ0 282 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 FRS2Q8WU20 508 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 NXPE3Q969Y0 559 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 FAM136AQ96C01 138 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 MYADMQ96S97 322 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 ZFYVE1Q9HBF4 777 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 CLEC1BQ9P126 229 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 PKP3Q9Y446 797 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 UBA6A0AVT1 1052 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 GOLGA8CPA6NN73 597 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 BIRC5O15392 142 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 CRABP2P29373 138 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 HMGCLP35914 325 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 KDSRQ06136 332 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 PIM3Q86V86 326 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 SFTPA1Q8IWL2 248 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 ETFBKMTQ8IXQ9 262 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 UTP4Q969X6 686 aaKnown RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 SCYL1Q96KG9 808 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 C20orf27Q9GZN8 174 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 ZFP14Q9HCL3 533 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 VWA7Q9Y334 891 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 NPIPB15A6NHN6 443 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 PRRT4C9JH25 899 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 TK2O00142 265 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 T-ENOLP0DO92 83 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 FGF3P11487 239 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 RPL26P61254 145 aaKnown RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 ADAM15Q13444 863 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 CDKN3Q16667 212 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 TYSND1Q2T9J0 566 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 KLHL32Q96NJ5 620 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 TUBGCP5Q96RT8 1024 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 KXD1Q9BQD3 176 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 CPEB1Q9BZB8 566 aaKnown RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 TRPV4Q9HBA0 871 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 ZFP69BQ9UJL9 534 aa18.85■□□□□ 0.61
TRIM47-201ENST00000254816 RPL26L1Q9UNX3 145 aaKnown RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 TCF20Q9UGU0 1960 aaKnown RBP18.85■□□□□ 0.61
TRIM47-201ENST00000254816 CAPN8A6NHC0 703 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 G3V2L1 256 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 CPA3P15088 417 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 XIAPP98170 497 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 RIPK1Q13546 671 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 PPP1R14CQ8TAE6 165 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 ECHDC3Q96DC8 303 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 TSNARE1Q96NA8 513 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 KLF11O14901 512 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 TBX10O75333 385 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 DLDP09622 509 aaKnown RBP18.84■□□□□ 0.61
TRIM47-201ENST00000254816 SBK3P0C264 359 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 FMO4P31512 558 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 NNMTP40261 264 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 RECQLP46063 649 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-201ENST00000254816 RAD51Q06609 339 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 CSHL1Q14406 222 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 ATAT1Q5SQI0 421 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 TMEM207Q6UWW9 146 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 TRIM42Q8IWZ5 723 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 FSTL5Q8N475 847 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-201ENST00000254816 TMEM151AQ8N4L1 468 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 KIAA1958Q8N8K9 716 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 AGAP11Q8TF27 550 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 GPR78Q96P69 363 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF576Q9H609 170 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 GPAMQ9HCL2 828 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 THG1LQ9NWX6 298 aaKnown RBP18.84■□□□□ 0.61
TRIM47-201ENST00000254816 GTSE1Q9NYZ3 720 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-201ENST00000254816 L3MBTL1Q9Y468 752 aa18.84■□□□□ 0.61
TRIM47-201ENST00000254816 OR1I1O60431 355 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 KLHL2O95198 593 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 BMP8BP34820 402 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 TIAL1Q01085 375 aaKnown RBP eCLIP18.83■□□□□ 0.61
TRIM47-201ENST00000254816 ATG16L1Q676U5 607 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 LRRC8EQ6NSJ5 796 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 FAM45BPQ6NSW5 357 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 CRTC1Q6UUV9 634 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 FAM151BQ6UXP7 276 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 TAS2R42Q7RTR8 314 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 FAM45AQ8TCE6 357 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 MAGEC3Q8TD91 643 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 HEXDCQ8WVB3 486 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 ANKRD49Q8WVL7 239 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 TRIM55Q9BYV6 548 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 LRMDAQ9H2I8 198 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 SLC27A6Q9Y2P4 619 aa18.83■□□□□ 0.61
TRIM47-201ENST00000254816 A0A087X1B8 175 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ANTXRLA6NF34 631 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 H7C0S8 307 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 ITM2AO43736 263 aa18.83■□□□□ 0.6
TRIM47-201ENST00000254816 NDUFS3O75489 264 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms