RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PDK3Q15120 406 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 IRF2BP1Q8IU81 584 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 SMG7Q92540 1137 aaKnown RBP18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC27A6Q9Y2P4 619 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 SMPD1P17405 629 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 CREMQ03060 361 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 BMT2Q1RMZ1 405 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 TEX44Q53QW1 395 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 SPOCK2Q92563 424 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 BTN2A3PQ96KV6 586 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 TBATAQ96M53 351 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 BRINP2Q9C0B6 783 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ACRP10323 421 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 MMP8P22894 467 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ICAM3P32942 547 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 CHN2P52757 468 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 PTPN5P54829 565 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 NOMO1Q15155 1222 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 RNF43Q68DV7 783 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 PCED1BQ96HM7 432 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 NARS2Q96I59 477 aaKnown RBP18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 GPR21Q99679 349 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ARL5CA6NH57 179 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 MAPKAPK2P49137 400 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 NDUFAF6Q330K2 333 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 LYPLAL1Q5VWZ2 237 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ARL14EPQ8N8R7 260 aaPredicted RBP18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ESAMQ96AP7 390 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 COQ7Q99807 217 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 ABCB10Q9NRK6 738 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 RAB23Q9ULC3 237 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 AP3D1O14617 1153 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ALOX15BO15296 676 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 CDK14O94921 469 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 TOP3BO95985 862 aaKnown RBP18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 TAS2R41P59536 307 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 BRMS1LQ5PSV4 323 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC25A24Q6NUK1 477 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 MFSD3Q96ES6 412 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ARL8BQ9NVJ2 186 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 A0A0J9YYE9 177 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 CCDC189A1A4V9 331 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 A8MUI8 341 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 GRM6O15303 877 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC22A3O75751 556 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 F7P08709 466 aaPredicted RBP18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 MPPE1Q53F39 396 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 C9orf64Q5T6V5 341 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ANKRD22Q5VYY1 191 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 FAM220AQ7Z4H9 259 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ULK2Q8IYT8 1036 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 DLG3Q92796 817 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 AXIN1O15169 862 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 LRCH4O75427 683 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ABHD2P08910 425 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SELPP16109 830 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 JAK1P23458 1154 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC6A2P23975 617 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC24A5Q71RS6 500 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 TSPAN14Q8NG11 270 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 PTCD3Q96EY7 689 aaKnown RBP18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 HMCESQ96FZ2 354 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 NRP2O60462 931 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 BMP7P18075 431 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 TACR2P21452 398 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 MED22Q15528 200 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 LPCAT4Q643R3 524 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 DENND6AQ8IWF6 608 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 CLEC4CQ8WTT0 213 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 PRDM16Q9HAZ2 1276 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 CMTM6Q9NX76 183 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 BTNL10A8MVZ5 291 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 PPM1AP35813 382 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 GPR107Q5VW38 600 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 LCLAT1Q6UWP7 414 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 C7orf61Q8IZ16 206 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 KAT2AQ92830 837 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 ITCHQ96J02 903 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 GSTK1Q9Y2Q3 226 aa18.65■□□□□ 0.58
SMARCC1-201ENST00000254480 DHRS12A0PJE2 317 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 TNFRSF21O75509 655 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 ETS2P15036 469 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF24P17028 368 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 UGT2B15P54855 530 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 TRABD2AQ86V40 505 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 PLD5Q8N7P1 536 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 OR7A2PQ8NGA2 310 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF354BQ96LW1 612 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 DEC1Q9P2X7 70 aa18.64■□□□□ 0.58
SMARCC1-201ENST00000254480 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 B4GALT4O60513 344 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 SERPINA6P08185 405 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 CFAP206Q8IYR0 622 aa18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 FAM98AQ8NCA5 519 aaKnown RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 RP9Q8TA86 221 aaKnown RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 DQX1Q8TE96 717 aaKnown RBP18.64■□□□□ 0.57
SMARCC1-201ENST00000254480 TTLL2Q9BWV7 592 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms