RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 F8VP50 259 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 PGDP52209 483 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 MTAPQ13126 283 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 OVOS1Q6IE37 1185 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF431Q8TF32 576 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 SEC14L1Q92503 715 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 GPRC5CQ9NQ84 441 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 UPB1Q9UBR1 384 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 KIF1AQ12756 1690 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 C2orf71A6NGG8 1288 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 CD36P16671 472 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC11A2P49281 568 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 CAMK1Q14012 370 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 C10orf120Q5SQS8 335 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 NELL1Q92832 810 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 C18orf25Q96B23 403 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ITCHQ96J02 903 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 TBL1YQ9BQ87 522 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 PDP1Q9P0J1 537 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 SNX6Q9UNH7 406 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 DNTTP04053 509 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 CETPP11597 493 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.314e-10■■■■■ 68.5
PCDHGA3-201ENST00000253812 RORCP51449 518 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ARF3P61204 181 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 RBM48Q5RL73 367 aaKnown RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 RPTNQ6XPR3 784 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF410Q86VK4 478 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 BBS4Q96RK4 519 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 KCNS3Q9BQ31 491 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 NKX1-2Q9UD57 310 aaPredicted RBP13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
PCDHGA3-201ENST00000253812 RFXANKO14593 260 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 TADA2AO75478 443 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 PIAS1O75925 651 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ORC1Q13415 861 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 TPRG1LQ5T0D9 272 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 OMDQ99983 421 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 TMEM246Q9BRR3 403 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 MAU2Q9Y6X3 613 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 HMGCRP04035 888 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CTSHP09668 335 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 MARCKSL1P49006 195 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 OXCT1P55809 520 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 MVKQ03426 396 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 PSMD5Q16401 504 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CD101Q93033 1021 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 FRMD6Q96NE9 622 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 PANX1Q96RD7 426 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 DCSTAMPQ9H295 470 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 KCNN2Q9H2S1 579 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 OR2AT4A6NND4 320 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 EML1O00423 815 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 BMP6P22004 513 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RPL3P39023 403 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CEBPGP53567 150 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RHBDL3P58872 404 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 MXD1Q05195 221 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RALGPS1Q5JS13 557 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ILDR1Q86SU0 546 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 AMIGO1Q86WK6 493 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 OOSP2Q86WS3 158 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC41A1Q8IVJ1 513 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 ZC3H7AQ8IWR0 971 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 PFDN5Q99471 154 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CHIAQ9BZP6 476 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 KANTRA0A1W2PQU2 76 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 SMCO3A2RU48 225 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 FGRP09769 529 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 GTF2E2P29084 291 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 SLC7A1P30825 629 aa13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 RPL38P63173 70 aaKnown RBP13.13□□□□□ -0.31
PCDHGA3-201ENST00000253812 CBLBQ13191 982 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms