RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 KDELC1Q6UW63 502 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 AMIGO2Q86SJ2 522 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 NPAS4Q8IUM7 802 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 NAT16Q8N8M0 369 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 CDYL2Q8N8U2 506 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 RAB3IL1Q8TBN0 382 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 PTERQ96BW5 349 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 FUBP3Q96I24 572 aaKnown RBP eCLIP15.02■□□□□ -0
SAFB2-201ENST00000252542 YME1L1Q96TA2 773 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 SEPT3Q9UH03 358 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 RGSL1A5PLK6 1076 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 OR6C75A6NL08 312 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 FKBP6O75344 327 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 EEF1DP29692 281 aaKnown RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 PPARGP37231 505 aaPredicted RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 FOXA1P55317 472 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 TUBB3Q13509 450 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 SLC5A9Q2M3M2 681 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 VPS26BQ4G0F5 336 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 CCSAPQ6IQ19 270 aaPredicted RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 TMEM207Q6UWW9 146 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 DNAJC14Q6Y2X3 702 aaPredicted RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 RBM44Q6ZP01 1051 aaKnown RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 CPNE9Q8IYJ1 553 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 C2CD4AQ8NCU7 369 aaPredicted RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 CDKN2AIPNLQ96HQ2 116 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 C8orf48Q96LL4 319 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 CASD1Q96PB1 797 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 BEGAINQ9BUH8 593 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 UPF3AQ9H1J1 476 aaKnown RBP15.02■□□□□ -0
SAFB2-201ENST00000252542 EFCAB1Q9HAE3 211 aa15.02■□□□□ -0
SAFB2-201ENST00000252542 LRRC37A2A6NM11 1700 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 SYN3O14994 580 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 GABRR2P28476 465 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 FOLH1Q04609 750 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 C18orf21Q32NC0 220 aaPredicted RBP15.02□□□□□ -0.01
SAFB2-201ENST00000252542 LSMEM2Q8N112 164 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 UMODL1-AS1Q8N2C9 162 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.02□□□□□ -0.01
SAFB2-201ENST00000252542 DRAXINQ8NBI3 349 aaPredicted RBP15.02□□□□□ -0.01
SAFB2-201ENST00000252542 NUDT8Q8WV74 236 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 ASIC4Q96FT7 647 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 TMEM248Q9NWD8 314 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 DNAJC28Q9NX36 388 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 DTNAQ9Y4J8 743 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 ANGPTL3Q9Y5C1 460 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 SNX13Q9Y5W8 968 aa15.02□□□□□ -0.01
SAFB2-201ENST00000252542 A0A1W2PQ67 120 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 H7C4K7 107 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PSMD12O00232 456 aaPredicted RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 AXIN1O15169 862 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 SEC24DO94855 1032 aaPredicted RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PSMC3P17980 439 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 AOC1P19801 751 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 NDST2P52849 883 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 CYS1Q717R9 158 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 FBXO39Q8N4B4 442 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 ZNF366Q8N895 744 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 DNAJB14Q8TBM8 379 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 SLC39A13Q96H72 371 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 SERPINI1Q99574 410 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PRDM16Q9HAZ2 1276 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 EML4Q9HC35 981 aaKnown RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 ANKRD6Q9Y2G4 727 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 INSIG1O15503 277 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 CLPTM1O96005 669 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 IGLV3-25P01717 112 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 RBP1P09455 135 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 UQCRBP14927 111 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PSAPL1Q6NUJ1 521 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PIANPQ8IYJ0 282 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 ARRDC2Q8TBH0 407 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 GRIN3AQ8TCU5 1115 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■□□□ 14.3
SAFB2-201ENST00000252542 OLA1Q9NTK5 396 aaKnown RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 MKS1Q9NXB0 559 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 TRMT6Q9UJA5 497 aaKnown RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 NEU3Q9UQ49 428 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 CPQQ9Y646 472 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 S1PR4O95977 384 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 ADRA1AP35348 466 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 STXBP5Q5T5C0 1151 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 DNAJB7Q7Z6W7 309 aaPredicted RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 PRPF18Q99633 342 aaKnown RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 CORO1BQ9BR76 489 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 C1QTNF1Q9BXJ1 281 aa15.01□□□□□ -0.01
SAFB2-201ENST00000252542 POLR3BQ9NW08 1133 aaPredicted RBP15.01□□□□□ -0.01
SAFB2-201ENST00000252542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15□□□□□ -0.01
SAFB2-201ENST00000252542 H3BMM5 538 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 PRDX3P30048 256 aaKnown RBP15□□□□□ -0.01
SAFB2-201ENST00000252542 CLCN5P51795 746 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 ZNF135P52742 658 aaPredicted RBP15□□□□□ -0.01
SAFB2-201ENST00000252542 SULT2A1Q06520 285 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 IL10RBQ08334 325 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 PIWIL4Q7Z3Z4 852 aaKnown RBP15□□□□□ -0.01
SAFB2-201ENST00000252542 FBXW8Q8N3Y1 598 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 VPS33AQ96AX1 596 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 ZNHIT2Q9UHR6 403 aa15□□□□□ -0.01
SAFB2-201ENST00000252542 CD84Q9UIB8 345 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms