RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TRABDQ9H4I3 376 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 CD84Q9UIB8 345 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 WASF3Q9UPY6 502 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 ZNF711Q9Y462 761 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 C5orf60A6NFR6 353 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 TMEM202A6NGA9 273 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 LMO7DNF2Z398 122 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 ANXA6P08133 673 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 DAB2P98082 770 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 LVRNQ6Q4G3 990 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 LYSMD3Q7Z3D4 306 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 RD3Q7Z3Z2 195 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 SLC13A5Q86YT5 568 aaPredicted RBP24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 SLC35B2Q8TB61 432 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 SCG3Q8WXD2 468 aaKnown RBP24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 GLMNQ92990 594 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 LRRC45Q96CN5 670 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 OXNAD1Q96HP4 312 aaPredicted RBP24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 LGR4Q9BXB1 951 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 GPR63Q9BZJ6 419 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 TCEAL2Q9H3H9 227 aaPredicted RBP24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 FAM83DQ9H4H8 585 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 HACD3Q9P035 362 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 DOLKQ9UPQ8 538 aa24.26■■□□□ 1.47
SDF2L1-201ENST00000248958 SPTBN2O15020 2390 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 RFPL3O75679 317 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 FGF1P05230 155 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 ACADVLP49748 655 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 RFLNAQ6ZTI6 216 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 GKN2Q86XP6 184 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 PNPLA1Q8N8W4 532 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 IPMKQ8NFU5 416 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 SCAMP4Q969E2 229 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 APOLD1Q96LR9 279 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 RIOK2Q9BVS4 552 aaKnown RBP24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 FGF22Q9HCT0 170 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 NFKBIL1Q9UBC1 381 aaPredicted RBP24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 NEUROG3Q9Y4Z2 214 aa24.25■■□□□ 1.47
SDF2L1-201ENST00000248958 ZSCAN12O43309 604 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 GCATO75600 419 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 CKMT1AP12532 417 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 DCDC1P59894 354 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 DNAJC3Q13217 504 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 C1orf61Q13536 156 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 SLC1A5Q15758 541 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 GALNT15Q8N3T1 639 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 CHCHD4Q8N4Q1 142 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 MAIP1Q8WWC4 291 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 OR1E3Q8WZA6 343 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 PDXPQ96GD0 296 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 HIC2Q96JB3 615 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 SCNM1Q9BWG6 230 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 FRMD8Q9BZ67 464 aaPredicted RBP24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 SHOC2Q9UQ13 582 aa24.24■■□□□ 1.47
SDF2L1-201ENST00000248958 PRSS38A1L453 326 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 FAM221BA6H8Z2 402 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 HYAL3O43820 417 aaPredicted RBP24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 SOD1P00441 154 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 STIP1P31948 543 aaKnown RBP24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 DEFB133Q30KQ1 61 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 SIRPB2Q5JXA9 342 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 C6orf132Q5T0Z8 1188 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 HENMT1Q5T8I9 393 aaKnown RBP24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 CCDC110Q8TBZ0 833 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 CLPBQ9H078 707 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 CAAP1Q9H8G2 361 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 CYP4F12Q9HCS2 524 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 MOSPD1Q9UJG1 213 aa24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 R3HDM2Q9Y2K5 976 aaKnown RBP24.23■■□□□ 1.47
SDF2L1-201ENST00000248958 TCRBV7S2A1N4TA0A589 114 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 F5H423 210 aaPredicted RBP24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 YY2O15391 372 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 CEACAM5P06731 702 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PIRTP0C851 137 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PSMB4P28070 264 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 HMGCLP35914 325 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 RPIAP49247 311 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PARP6Q2NL67 630 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 P3H1Q32P28 736 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 ZDHHC20Q5W0Z9 365 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PDPK2PQ6A1A2 396 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 ARHGEF18Q6ZSZ5 1173 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 SLC25A41Q8N5S1 370 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 EID2BQ96D98 161 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 COX14Q96I36 57 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PDLIM2Q96JY6 352 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 WDR24Q96S15 920 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 BOCQ9BWV1 1114 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 MRPL40Q9NQ50 206 aaKnown RBP24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 SLC17A4Q9Y2C5 497 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 PTPRBP23467 1997 aa24.22■■□□□ 1.47
SDF2L1-201ENST00000248958 GP1BAP07359 652 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 IVLP07476 585 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 E2F1Q01094 437 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 TMPRSS7Q7RTY8 843 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 FAM71DQ8N9W8 422 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 AGAP2Q99490 1192 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 TMEM121Q9BTD3 319 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 ZSCAN5AQ9BUG6 496 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 TLR10Q9BXR5 811 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms