RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 TM6SF2Q9BZW4 377 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FKBPLQ9UIM3 349 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 IKZF3Q9UKT9 509 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 RAI2Q9Y5P3 530 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MBL2P11226 248 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ETS2P15036 469 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 PRDX6P30041 224 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 TUFMP49411 452 aaKnown RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 KPNA1P52294 538 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CEACAM7Q14002 265 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MMEL1Q495T6 779 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 PIANPQ8IYJ0 282 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 DCBLD1Q8N8Z6 715 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 PSKH2Q96QS6 385 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 TRIB3Q96RU7 358 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MTRRQ9UBK8 725 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 LRCH1Q9Y2L9 728 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FCF1Q9Y324 198 aaKnown RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FNDC1Q4ZHG4 1894 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 A0A1B0GTL3 188 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SUPT3HB4E1H0 165 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 PRRG1O14668 218 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FKBP6O75344 327 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SUPT3HO75486 399 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 PRLP01236 227 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF37AP17032 561 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FDXRP22570 491 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 STC1P52823 247 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MS4A2Q01362 244 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CYTH1Q15438 398 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 UNC50Q53HI1 259 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF678Q5SXM1 525 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SLC8B1Q6J4K2 584 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SLAIN1Q8ND83 568 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 TRPC4APQ8TEL6 797 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ZFAND2BQ8WV99 257 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 FATE1Q969F0 183 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 SLC30A3Q99726 388 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 TTLL2Q9BWV7 592 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CCDC68Q9H2F9 335 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 ZNF385DQ9H6B1 395 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 EML4Q9HC35 981 aaKnown RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 MID1IP1Q9NPA3 183 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 POLR3BQ9NW08 1133 aaPredicted RBP15.73■□□□□ 0.11
LRFN1-201ENST00000248668 BTRCQ9Y297 605 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 CDH23Q9H251 3354 aa15.73■□□□□ 0.11
LRFN1-201ENST00000248668 TCAF2A6NFQ2 919 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 H0Y626 953 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 UBDO15205 165 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 COQ9O75208 318 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 NDUFS3O75489 264 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ZCCHC18P0CG32 403 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 CTPS1P17812 591 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ECT2LQ008S8 904 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 DSG1Q02413 1049 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 FLOT2Q14254 428 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 PTPRNQ16849 979 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 GRAMD1BQ3KR37 738 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ZRANB3Q5FWF4 1079 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 PSAPL1Q6NUJ1 521 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 GDPD5Q8WTR4 605 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 IGSF21Q96ID5 467 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 GPR21Q99679 349 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 CCDC28BQ9BUN5 200 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 UTP6Q9NYH9 597 aaKnown RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 IQCF5A8MTL0 148 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 K7ERQ8 282 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 TBL1XO60907 577 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ALDH1A3P47895 512 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SH3BP2P78314 561 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 RALGDSQ12967 914 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 TSNQ15631 228 aaKnown RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 C16orf89Q6UX73 402 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 DDIASQ8IXT1 998 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 CRIPAKQ8N1N5 446 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 HMGCLL1Q8TB92 370 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ANKRD27Q96NW4 1050 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ECSITQ9BQ95 431 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SLC39A3Q9BRY0 314 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 VCXQ9H320 206 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 PREBQ9HCU5 417 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SEMA4BQ9NPR2 832 aaPredicted RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 YIPF1Q9Y548 306 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 A8MX80 341 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 CDC7O00311 574 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 HOXA2O43364 376 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 KDELR3O43731 214 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 NIPSNAP2O75323 286 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 CLDN11O75508 207 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 IMPDH1P20839 514 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SMAD3P84022 425 aaKnown RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 FASTKQ14296 549 aaKnown RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 ACBD5Q5T8D3 534 aaPredicted RBP15.72■□□□□ 0.11
LRFN1-201ENST00000248668 TXNDC8Q6A555 127 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 EBF3Q9H4W6 596 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 IL1RL2Q9HB29 575 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 SCOCQ9UIL1 159 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 AK5Q9Y6K8 562 aa15.72■□□□□ 0.11
LRFN1-201ENST00000248668 PFDN1O60925 122 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms