RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PLK1P53350 603 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 ADGRE1Q14246 886 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 GRIN2CQ14957 1233 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 RETSATQ6NUM9 610 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 ADIPOR2Q86V24 386 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 TTC8Q8TAM2 541 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 SORCS1Q8WY21 1168 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 ACDQ96AP0 544 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 OTUB2Q96DC9 234 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 PCDHB9Q9Y5E1 797 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 C2orf81A6NN90 581 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 LTA4HP09960 611 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 SRCP12931 536 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 LPOP22079 712 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 NAGLUP54802 743 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 GEN1Q17RS7 908 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 TTC31Q49AM3 519 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 DGKKQ5KSL6 1271 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 NAIF1Q69YI7 327 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 FAM45BPQ6NSW5 357 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 TXNDC5Q8NBS9 432 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 FAM45AQ8TCE6 357 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 VOPP1Q96AW1 172 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 SGF29Q96ES7 293 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 PLA2G2FQ9BZM2 168 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 DRC3Q9H069 523 aa23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 POLR3BQ9NW08 1133 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-201ENST00000248121 CAPN14A8MX76 684 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 TRAFD1O14545 582 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 HSPA4LO95757 839 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 CDKN1CP49918 316 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 RALGPS1Q5JS13 557 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 VWA5B1Q5TIE3 1220 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 AFTPHQ6ULP2 937 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 VITQ6UXI7 678 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 TREML1Q86YW5 311 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 CAMK1DQ8IU85 385 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 INPP5DQ92835 1189 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 KLC4Q9NSK0 619 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 CLDND1Q9NY35 253 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 LNPEPQ9UIQ6 1025 aa23.3■■□□□ 1.32
SYNGR3-201ENST00000248121 NEMP2A6NFY4 417 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 ADH5P11766 374 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 LTBRP36941 435 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 IDH3AP50213 366 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 AP1S1P61966 158 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 KRT72Q14CN4 511 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 FAM83EQ2M2I3 478 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 GAB4Q2WGN9 574 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 SREK1Q8WXA9 508 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 EID2BQ96D98 161 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 GDE1Q9NZC3 331 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 EVLQ9UI08 416 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 FKBPLQ9UIM3 349 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 CDH7Q9ULB5 785 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 KIAA1549LQ6ZVL6 1849 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 SLC9A3R1O14745 358 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 MGRN1O60291 552 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 PIGNO95427 931 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 KCNA5P22460 613 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 PRKAA2P54646 552 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 AGAP9Q5VTM2 703 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 LSMEM2Q8N112 164 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 PIH1D2Q8WWB5 315 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 RILPQ96NA2 401 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 CDH19Q9H159 772 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 STN1Q9H668 368 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 BPIFA1Q9NP55 256 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 DNAJC28Q9NX36 388 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 SLCO3A1Q9UIG8 710 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 CORO1CQ9ULV4 474 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 MTCH2Q9Y6C9 303 aa23.29■■□□□ 1.32
SYNGR3-201ENST00000248121 PGLSO95336 258 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 MPSTP25325 297 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 SUOXP51687 545 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 RCN2Q14257 317 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 GRM2Q14416 872 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 ARL13AQ5H913 290 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 SDCCAG8Q86SQ7 713 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 PIANPQ8IYJ0 282 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 CYB5D2Q8WUJ1 264 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 LPGAT1Q92604 370 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 AARSD1Q9BTE6 412 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 HPS4Q9NQG7 708 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 MED16Q9Y2X0 877 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 PMLP29590 882 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 HNRNPH1P31943 449 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 KPNA2P52292 529 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 PFKPQ01813 784 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 PEX6Q13608 980 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 MAPK15Q8TD08 544 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 SCG3Q8WXD2 468 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 MYO19Q96H55 970 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 NSL1Q96IY1 281 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 POMKQ9H5K3 350 aa23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 INTS10Q9NVR2 710 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-201ENST00000248121 BNIP3LO60238 219 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 SERPINA6P08185 405 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 ALPIP09923 528 aa23.27■■□□□ 1.32
SYNGR3-201ENST00000248121 CTPS1P17812 591 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms