RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 DUSP12Q9UNI6 340 aa11□□□□□ -0.65
CCDC170-201ENST00000239374 POLR3HQ9Y535 204 aaPredicted RBP11□□□□□ -0.65
CCDC170-201ENST00000239374 GPC6Q9Y625 555 aaPredicted RBP11□□□□□ -0.65
CCDC170-201ENST00000239374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 FADS2O95864 444 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CDK4P11802 303 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 AXLP30530 894 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SOAT1P35610 550 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TPTEP56180 551 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MYBPC1Q00872 1141 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RBM12BQ8IXT5 1001 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 FAM9CQ8IZT9 166 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CENPSQ8N2Z9 138 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ESAMQ96AP7 390 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MTERF3Q96E29 417 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ADGRE3Q9BY15 652 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 IRF6O14896 467 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RSL1D1O76021 490 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MAPK1P28482 360 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CPOXP36551 454 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ZC3H12BQ5HYM0 836 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RRM2BQ7LG56 351 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SPATA19Q7Z5L4 167 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SLC44A2Q8IWA5 706 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TRPV3Q8NET8 790 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 OR4L1Q8NH43 312 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MYLPFQ96A32 169 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SOX17Q9H6I2 414 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RASSF1Q9NS23 344 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 OPTCQ9UBM4 332 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 GIMAP2Q9UG22 337 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 PADI4Q9UM07 663 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CDC14AQ9UNH5 594 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 DERAQ9Y315 318 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 UBR2Q8IWV8 1755 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SH3PXD2BA1X283 911 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SDHDO14521 159 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 LSM1O15116 133 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 NOBOXO60393 691 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ANGPTL1O95841 491 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 HALP42357 657 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 NIPAL4Q0D2K0 466 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 PWP1Q13610 501 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 FOXB2Q5VYV0 432 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ZNF549Q6P9A3 640 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 LBX2Q6XYB7 198 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 AKAP14Q86UN6 197 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 LRRC58Q96CX6 371 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 MUC13Q9H3R2 512 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 EHD3Q9NZN3 535 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SLC2A6Q9UGQ3 507 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 PTBP2Q9UKA9 531 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ALS2Q96Q42 1657 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SYNDIG1LA6NDD5 238 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 AGRPO00253 132 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RGS20O76081 388 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SLC11A2P49281 568 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 SCNN1GP51170 649 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CYP4F2P78329 520 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CDKL1Q00532 357 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 CYP4F3Q08477 520 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TRIM32Q13049 653 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 LCP2Q13094 533 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RBM20Q5T481 1227 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 RAP1GAP2Q684P5 730 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TXNDC5Q8NBS9 432 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 ELMO1Q92556 727 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 PROX1Q92786 737 aa10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 TRPM3Q9HCF6 1732 aaPredicted RBP10.99□□□□□ -0.65
CCDC170-201ENST00000239374 IDH3BO43837 385 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 ITGALP20701 1170 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 CES1P23141 567 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 CCNCP24863 283 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 IFNA8P32881 189 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 ATP6V0D1P61421 351 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 ECT2LQ008S8 904 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 PPP1R8Q12972 351 aaKnown RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 FAM187BQ17R55 369 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 CYS1Q717R9 158 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 EXOC2Q96KP1 924 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 HNRNPABQ99729 332 aaKnown RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 TBCCD1Q9NVR7 557 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 TNPO3Q9Y5L0 923 aaKnown RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 CYBBP04839 570 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 ALOX15P16050 662 aaPredicted RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 IL12AP29459 219 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 PIK3CGP48736 1102 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 MTPNP58546 118 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 ILF2Q12905 390 aaKnown RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 RFX4Q33E94 735 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 INTS11Q5TA45 600 aaKnown RBP10.98□□□□□ -0.65
CCDC170-201ENST00000239374 GLT1D1Q96MS3 346 aa10.98□□□□□ -0.65
CCDC170-201ENST00000239374 HAPLN3Q96S86 360 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms