RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CILP2Q8IUL8 1156 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 CPA6Q8N4T0 437 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 MYO19Q96H55 970 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 SIKE1Q9BRV8 207 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
SLIRP-201ENST00000238688 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 NCDNQ9UBB6 729 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 PPIL1Q9Y3C6 166 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 PSAT1Q9Y617 370 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 THADAQ6YHU6 1953 aa13.2□□□□□ -0.3
SLIRP-201ENST00000238688 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TPP1O14773 563 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 UGT1A9O60656 530 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TGDSO95455 350 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 CYP17A1P05093 508 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 ADH5P11766 374 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 STMN1P16949 149 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TAC1P20366 129 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 GRK2P25098 689 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 CD70P32970 193 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 HMGCLP35914 325 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 EIF2DP41214 584 aaKnown RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 RECQLP46063 649 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 RGRP47804 291 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SERPINB4P48594 390 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 PXNP49023 591 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 EPHB1P54762 984 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SLC12A2P55011 1212 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 ADARP55265 1226 aaKnown RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 POLR2LP62875 67 aaKnown RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 ASPHQ12797 758 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 IHHQ14623 411 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TYSND1Q2T9J0 566 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 C22orf39Q6P5X5 142 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 CES3Q6UWW8 571 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 CERS6Q6ZMG9 384 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 PIGWQ7Z7B1 504 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 CLEC14AQ86T13 490 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TMEM25Q86YD3 366 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SFTPA1Q8IWL2 248 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 UNC5BQ8IZJ1 945 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 KIRREL3Q8IZU9 778 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 STK40Q8N2I9 435 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 TTC1Q99614 292 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 UGT1A7Q9HAW7 530 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 UGT1A10Q9HAW8 530 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 UGT1A8Q9HAW9 530 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SNX15Q9NRS6 342 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 PHTF1Q9UMS5 762 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 PKP3Q9Y446 797 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
SLIRP-201ENST00000238688 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 K7EQS6 105 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 TRAFD1O14545 582 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 AHSGP02765 367 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 SRCP12931 536 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 ALDH3A1P30838 453 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CNR2P34972 360 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 SLC1A2P43004 574 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 SLC6A11P48066 632 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 TTPAP49638 278 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 SEC24CP53992 1094 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 RAB10P61026 200 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 TRAF2Q12933 501 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 BMPR2Q13873 1038 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 PDE1CQ14123 709 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 SIM2Q14190 667 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 DHCR24Q15392 516 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 QPCTQ16769 361 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 FUT11Q495W5 492 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 LYPLAL1Q5VWZ2 237 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 TTC19Q6DKK2 380 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 LAIR1Q6GTX8 287 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 FAM45BPQ6NSW5 357 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 BRAT1Q6PJG6 821 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 C12orf40Q86WS4 652 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CBARPQ8N350 705 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 GBP7Q8N8V2 638 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-201ENST00000238688 CCDC197Q8NCU1 140 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 OR4L1Q8NH43 312 aa13.18□□□□□ -0.3
SLIRP-201ENST00000238688 FAM45AQ8TCE6 357 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms