RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 STMN2Q93045 179 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 IGSF8Q969P0 613 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 NT5C3BQ969T7 300 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 NSL1Q96IY1 281 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 SERPINB11Q96P15 392 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 SEMA3CQ99985 751 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 GLOD4Q9HC38 313 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 MOCS1Q9NZB8 636 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 A0A0D9SEW6 157 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 PRRT4C9JH25 899 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 RAMP2O60895 175 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 TBL1XO60907 577 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 GLRA3O75311 464 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 HNRNPLP14866 589 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS4B-201ENST00000238497 PMLP29590 882 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 PGM1P36871 562 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 ETV4P43268 484 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 CDK16Q00536 496 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 PTPRRQ15256 657 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 PIK3R6Q5UE93 754 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 CES4AQ5XG92 561 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 SERPINA13PQ6UXR4 307 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 FBXO27Q8NI29 283 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 MTBPQ96DY7 904 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 DHRS4Q9BTZ2 278 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 NUF2Q9BZD4 464 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 RCOR3Q9P2K3 495 aaPredicted RBP8.67□□□□□ -1.02
VPS4B-201ENST00000238497 GREB1Q4ZG55 1949 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 DENND4CQ5VZ89 1909 aa8.67□□□□□ -1.02
VPS4B-201ENST00000238497 CABIN1Q9Y6J0 2220 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ANXA9O76027 345 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ANP32DO95626 131 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 AHSGP02765 367 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CHRNGP07510 517 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TCN1P20061 433 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NTSR1P30989 418 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 EIF2DP41214 584 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SLC25A3Q00325 362 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SLC18A2Q05940 514 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 AASDHQ4L235 1098 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CNSTQ6PJW8 725 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TMEFF1Q8IYR6 380 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CARNMT1Q8N4J0 409 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 GAB3Q8WWW8 586 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SREK1Q8WXA9 508 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 PIGKQ92643 395 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NTAN1Q96AB6 310 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 PLD4Q96BZ4 506 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NXNL1Q96CM4 212 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ARHGEF38Q9NXL2 777 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 AAR2Q9Y312 384 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 HBS1LQ9Y450 684 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ACACBO00763 2458 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NCF1BA6NI72 391 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NCF1CA8MVU1 366 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 AIM2O14862 343 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 MTSS1O43312 755 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 PLIN3O60664 434 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NCF1P14598 390 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CNR2P34972 360 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SCNN1AP37088 669 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 GALNT2Q10471 571 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 FNDC3BQ53EP0 1204 aaKnown RBP8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ZNF789Q5FWF6 425 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SPANXN3Q5MJ09 141 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TEDDM1Q5T9Z0 273 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 LAIR1Q6GTX8 287 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 RINLQ6ZS11 566 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 FRMD1Q8N878 549 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 ATP6V0D2Q8N8Y2 350 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 GANCQ8TET4 914 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CYB5D2Q8WUJ1 264 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 IL22Q9GZX6 179 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 WWP1Q9H0M0 922 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 MUC3BQ9H195 1237 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 SLC6A17Q9H1V8 727 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 NMRAL1Q9HBL8 299 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 RRN3Q9NYV6 651 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 DCDC2Q9UHG0 476 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 TRHDEQ9UKU6 1024 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CLEC4EQ9ULY5 219 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 PLA2G4CQ9UP65 541 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CHD8Q9HCK8 2581 aa8.66□□□□□ -1.02
VPS4B-201ENST00000238497 CACNG3O60359 315 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 MAFKO60675 156 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 PDE5AO76074 875 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 EPHX1P07099 455 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 RETP07949 1114 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 GSTA1P08263 222 aa8.65□□□□□ -1.02
VPS4B-201ENST00000238497 DLDP09622 509 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms