RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NXF3Q9H4D5 531 aaKnown RBP14.09□□□□□ -0.15
SF1-201ENST00000227503 TLR9Q9NR96 1032 aa14.09□□□□□ -0.15
SF1-201ENST00000227503 ADAM28Q9UKQ2 775 aa14.09□□□□□ -0.15
SF1-201ENST00000227503 DSEQ9UL01 958 aa14.09□□□□□ -0.15
SF1-201ENST00000227503 GINS2Q9Y248 185 aa14.09□□□□□ -0.15
SF1-201ENST00000227503 RECQL4O94761 1208 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 TCF3P15923 654 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 AGXTP21549 392 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 CASP2P42575 452 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 IST1P53990 364 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 SQLEQ14534 574 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 PAFAH1B3Q15102 231 aaKnown RBP14.08□□□□□ -0.15
SF1-201ENST00000227503 CATSPEREQ5SY80 951 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 UBE2UQ5VVX9 321 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 ZC3HC1Q86WB0 502 aaKnown RBP14.08□□□□□ -0.15
SF1-201ENST00000227503 CGREF1Q99674 301 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.158e-10■■■□□ 18.4
SF1-201ENST00000227503 TMEM9Q9P0T7 183 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 AASSQ9UDR5 926 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 RAD54BQ9Y620 910 aa14.08□□□□□ -0.15
SF1-201ENST00000227503 TARM1B6A8C7 271 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 DAB1O75553 588 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 AHSGP02765 367 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 HTR1AP08908 422 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 AKAP5P24588 427 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 ADIGQ0VDE8 80 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 MEP1AQ16819 746 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 FAM209AQ5JX71 171 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 CATSPER4Q7RTX7 472 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 SLC22A17Q8WUG5 538 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 FAM149B1Q96BN6 582 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 DUS3LQ96G46 650 aaKnown RBP14.08□□□□□ -0.16
SF1-201ENST00000227503 NPY6RQ99463 290 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 AKIP1Q9NQ31 210 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 PRDM8Q9NQV8 689 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 ABCB10Q9NRK6 738 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 GDAP2Q9NXN4 497 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 ANKMY1Q9P2S6 941 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 UBQLN1Q9UMX0 589 aaKnown RBP14.08□□□□□ -0.16
SF1-201ENST00000227503 TRPC5OSA6NMA1 111 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 DCLK1O15075 740 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 GPR32O75388 356 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 CAPN3P20807 821 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 CSHL1Q14406 222 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 INPP5AQ14642 412 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 DPY19L1Q2PZI1 675 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 BROXQ5VW32 411 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 SPRED1Q7Z699 444 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 ZCCHC7Q8N3Z6 543 aaKnown RBP14.08□□□□□ -0.16
SF1-201ENST00000227503 TERB1Q8NA31 727 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 PSMA8Q8TAA3 256 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 HEXDCQ8WVB3 486 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 EXT2Q93063 718 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 FKBP10Q96AY3 582 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 MAGED4Q96JG8 741 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 TMEM74Q96NL1 305 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 PSD2Q9BQI7 771 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 HMG20AQ9NP66 347 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 SETD4Q9NVD3 440 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 BFARQ9NZS9 450 aa14.08□□□□□ -0.16
SF1-201ENST00000227503 PPP6CO00743 305 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 TIMM44O43615 452 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 ALBP02768 609 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 CD68P34810 354 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 CDH13P55290 713 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 CYHR1Q6ZMK1 362 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 KDELC2Q7Z4H8 507 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 CUZD1Q86UP6 607 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 HS3ST5Q8IZT8 346 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SPARTQ8N0X7 666 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SLC25A23Q9BV35 468 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 MRPL40Q9NQ50 206 aaKnown RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 PNMA8BQ9ULN7 279 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 A0A0J9YYE9 177 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SMIM28A0A1B0GU29 152 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SLCO1B7G3V0H7 640 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 HUS1O60921 280 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 DDNO94850 711 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 VBP1P61758 197 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SYPL2Q5VXT5 272 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 NOTUMQ6P988 496 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 PLEKHG7Q6ZR37 379 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 TMEM135Q86UB9 458 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 OSTM1Q86WC4 334 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 HEATR4Q86WZ0 1026 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SIX5Q8N196 739 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 SFRP1Q8N474 314 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 GPR78Q96P69 363 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 FAM49AQ9H0Q0 323 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 TRIT1Q9H3H1 467 aaKnown RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 GPN2Q9H9Y4 310 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.07□□□□□ -0.16
SF1-201ENST00000227503 ACOT9Q9Y305 439 aa14.07□□□□□ -0.16
SF1-201ENST00000227503 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
SF1-201ENST00000227503 H3BMM5 538 aa14.06□□□□□ -0.16
SF1-201ENST00000227503 BEST1O76090 585 aa14.06□□□□□ -0.16
SF1-201ENST00000227503 NADKO95544 446 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms