RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RHOJQ9H4E5 214 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 KLF15Q9UIH9 416 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ABCC6O95255 1503 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
CLIP2-201ENST00000223398 VNN1O95497 513 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 MYBL2P10244 700 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 CDKN2BP42772 138 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 MANFP55145 182 aaKnown RBP18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF549Q6P9A3 640 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 FOXR2Q6PJQ5 311 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 TSSK3Q96PN8 268 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 LEF1Q9UJU2 399 aaPredicted RBP18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ENO4A6NNW6 628 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 DDX3YO15523 660 aaKnown RBP18.41■□□□□ 0.54
CLIP2-201ENST00000223398 RXRGP48443 463 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 MAPKAPK2P49137 400 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 FOXM1Q08050 763 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 USP4Q13107 963 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 TEAD4Q15561 434 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 TSTD1Q8NFU3 115 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 QKIQ96PU8 341 aaKnown RBP eCLIP18.41■□□□□ 0.542e-7■■■■□ 22
CLIP2-201ENST00000223398 ANAPC2Q9UJX6 822 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 COLEC10Q9Y6Z7 277 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 SASH3O75995 380 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 MYL12AP19105 171 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 APOL4Q9BPW4 351 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 CCSER2Q9H7U1 834 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 RNF186Q9NXI6 227 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 SIRPGQ9P1W8 387 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 SIGLEC1Q9BZZ2 1709 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 MATN3O15232 486 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ALOX15BO15296 676 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 GRIA3P42263 894 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF605Q86T29 641 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 PYDC1Q8WXC3 89 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 OR52E6Q96RD3 313 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 FBXW11Q9UKB1 542 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 RAP2CQ9Y3L5 183 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 ADGRA3Q8IWK6 1321 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 JAK1P23458 1154 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ARMC8Q8IUR7 673 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 LCN9Q8WX39 176 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 APOLD1Q96LR9 279 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 EPB41L4BQ9H329 900 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 AP4S1Q9Y587 144 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 LTN1O94822 1766 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 SLC28A2O43868 658 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 DLGAP3O95886 979 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 HNRNPCP07910 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ABHD2P08910 425 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 HK2P52789 917 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 TPGS2Q68CL5 300 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 TMEM220Q6QAJ8 160 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 CKAP2Q8WWK9 683 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 MFSD3Q96ES6 412 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ELOVL2Q9NXB9 296 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 FKBPLQ9UIM3 349 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF490Q9ULM2 529 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 BCLAF3A2AJT9 711 aaKnown RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 C2CD4BA6NLJ0 364 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 RFXANKO14593 260 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 KRT75O95678 551 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ALG11Q2TAA5 492 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 C9orf64Q5T6V5 341 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 SERPINA9Q86WD7 417 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ACMSDQ8TDX5 336 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 STYXQ8WUJ0 223 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 CYB5D2Q8WUJ1 264 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 NFKBIL1Q9UBC1 381 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 PCDHB1Q9Y5F3 818 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 OR6B1O95007 311 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 RPL3P39023 403 aaKnown RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 DHPSP49366 369 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 MRPS35P82673 323 aaKnown RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 CLEC20AQ6ZU45 233 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 SLC25A51Q9H1U9 297 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 PNPOQ9NVS9 261 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 FZD10Q9ULW2 581 aa18.4■□□□□ 0.54
CLIP2-201ENST00000223398 PARP4Q9UKK3 1724 aaKnown RBP18.4■□□□□ 0.54
CLIP2-201ENST00000223398 A0A0U1RQF3 1178 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 MYL12BO14950 172 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 HTRA3P83110 453 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 PTSQ03393 145 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 RAB30Q15771 203 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 SYPL2Q5VXT5 272 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 SLC38A3Q99624 504 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 PTPN18Q99952 460 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 DNAJC11Q9NVH1 559 aa18.39■□□□□ 0.54
CLIP2-201ENST00000223398 FPGTO14772 594 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 TSHRP16473 764 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 AMZ1Q400G9 498 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 CCNYL2Q5T2Q4 361 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 HGSNATQ68CP4 663 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 R3HCC1LQ7Z5L2 792 aaKnown RBP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 COPG1Q9Y678 874 aaKnown RBP18.39■□□□□ 0.53
CLIP2-201ENST00000223398 TK2O00142 265 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 C2P06681 752 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 CA9Q16790 459 aa18.39■□□□□ 0.53
CLIP2-201ENST00000223398 UBXN11Q5T124 520 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms