RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GPR1P46091 355 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SPINT3P49223 89 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 CDK3Q00526 305 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 DPTQ07507 201 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SPARCL1Q14515 664 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SLC1A5Q15758 541 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 CCDC157Q569K6 752 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 TMC3Q7Z5M5 1100 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 PRUNE1Q86TP1 453 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 NRSN1Q8IZ57 195 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SLC35F6Q8N357 371 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
LSM5-201ENST00000223084 CCHCR1Q8TD31 782 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 PDXPQ96GD0 296 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 LRRC61Q9BV99 259 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 FSD1LQ9BXM9 530 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 TEX101Q9BY14 249 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 GPR63Q9BZJ6 419 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
LSM5-201ENST00000223084 ZFYVE1Q9HBF4 777 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 FGF22Q9HCT0 170 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 KCTD5Q9NXV2 234 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 MOSPD1Q9UJG1 213 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 ACACBO00763 2458 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ATRXP46100 2492 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 INPP4BO15327 924 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 AQP9O43315 295 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 TNFSF14O43557 240 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 RASGRP1O95267 797 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 METTL18O95568 372 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 EPOP01588 193 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 HK3P52790 923 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 FOXC1Q12948 553 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 DNAJC3Q13217 504 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 PRPSAP1Q14558 356 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 OASLQ15646 514 aaKnown RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 KCTD19Q17RG1 926 aaPredicted RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 DEFB133Q30KQ1 61 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 DOK6Q6PKX4 331 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ARHGEF18Q6ZSZ5 1173 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 GLRX5Q86SX6 157 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 TRIM74Q86UV6 250 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 GPR26Q8NDV2 337 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 OR56A4Q8NGH8 313 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 BLOC1S5Q8TDH9 187 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 BTN2A2Q8WVV5 523 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 CLPBQ9H078 707 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 FAM83DQ9H4H8 585 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 BPIFA1Q9NP55 256 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 PHPT1Q9NRX4 125 aaPredicted RBP12.63□□□□□ -0.39
LSM5-201ENST00000223084 SPASTQ9UBP0 616 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 TMEM98Q9Y2Y6 226 aa12.63□□□□□ -0.39
LSM5-201ENST00000223084 ARHGEF17Q96PE2 2063 aaPredicted RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 FADS2P1A8MWK0 482 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 USP12O75317 370 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 TNFP01375 233 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 FUCA1P04066 466 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 ATP1A1P05023 1023 aaKnown RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 CEACAM5P06731 702 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 CTSEP14091 401 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 ETS1P14921 441 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 BPIP17213 487 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 SPINK2P20155 84 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 TEAD1P28347 426 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 PMLP29590 882 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 ADRA1AP35348 466 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 TNNT3P45378 269 aaPredicted RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 POLD2P49005 469 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 ADAMTSL4Q6UY14 1074 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 GLIS1Q8NBF1 620 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 ATL2Q8NHH9 583 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 CYP4F12Q9HCS2 524 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 NLGN3Q9NZ94 848 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 CNOT6Q9ULM6 557 aaKnown RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 AAR2Q9Y312 384 aaKnown RBP12.62□□□□□ -0.39
LSM5-201ENST00000223084 JRKLQ9Y4A0 524 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 KNTC1P50748 2209 aa12.62□□□□□ -0.39
LSM5-201ENST00000223084 ASXL3Q9C0F0 2248 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms