RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 EML3Q32P44 896 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 VPS26BQ4G0F5 336 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MS4A13Q5J8X5 152 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 LPCAT2Q7L5N7 544 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 PSMG2Q969U7 264 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 C9orf16Q9BUW7 83 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 RIMKLBQ9ULI2 386 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 A0A087WXM4 84 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 DYTNA2CJ06 578 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 GOT2P00505 430 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 SLC4A1P02730 911 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 FGF1P05230 155 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 GPIP06744 558 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 FCGR1AP12314 374 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 OGNP20774 298 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 SLC6A2P23975 617 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 FASP25445 335 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 TBX4P57082 545 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 IL10RBQ08334 325 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MGAT3Q09327 533 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 LCP2Q13094 533 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 GRB7Q14451 532 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CCL14Q16627 93 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 DDIASQ8IXT1 998 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CBR4Q8N4T8 237 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 SH3RF2Q8TEC5 729 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 EXT2Q93063 718 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 LRRC58Q96CX6 371 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CENPNQ96H22 339 aaPredicted RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 TBATAQ96M53 351 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 ATOH8Q96SQ7 321 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 TRIM54Q9BYV2 358 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CMTM6Q9NX76 183 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRP54-201ENST00000216774 KCTD3Q9Y597 815 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 A0A0U1RQF3 1178 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 TRIM64A6NGJ6 449 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 ZNF701M0R085 212 aaPredicted RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 UBXN8O00124 270 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 PLOD2O00469 737 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 RPP40O75818 363 aaKnown RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 SIX3O95343 332 aaPredicted RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 EPOP01588 193 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 PBX3P40426 434 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 NAA20P61599 178 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 YWHAHQ04917 246 aaPredicted RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 GRIK2Q13002 908 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 ALFQ53S48 1182 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 SPRYD7Q5W111 196 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 OGFOD2Q6N063 350 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 BLOC1S3Q6QNY0 202 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 SERINC5Q86VE9 423 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 SPPL2CQ8IUH8 684 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 DCP1BQ8IZD4 617 aaKnown RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 PGBD5Q8N414 524 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 RYBPQ8N488 228 aaPredicted RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 TMIGD2Q96BF3 282 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 TUBGCP3Q96CW5 907 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 FBXO44Q9H4M3 255 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 IL1RL2Q9HB29 575 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 SLC52A3Q9NQ40 469 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 SMOXQ9NWM0 555 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 GMPR2Q9P2T1 348 aaKnown RBP13.27□□□□□ -0.28
SRP54-201ENST00000216774 CPA4Q9UI42 421 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 AURKCQ9UQB9 309 aa13.27□□□□□ -0.28
SRP54-201ENST00000216774 MYO16Q9Y6X6 1858 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 DLGAP1O14490 977 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 KERAO60938 352 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 CNTN5O94779 1100 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 GFAPP14136 432 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 HGFP14210 728 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 NELFEP18615 380 aaKnown RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 FOXA1P55317 472 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 ESRRGP62508 458 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 RPS6KA2Q15349 733 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 PARP15Q460N3 678 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 GDF6Q6KF10 455 aaPredicted RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 SPATA19Q7Z5L4 167 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 KIAA1191Q96A73 305 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 BTN2A3PQ96KV6 586 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 AARSD1Q9BTE6 412 aaKnown RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 ADI1Q9BV57 179 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.29
SRP54-201ENST00000216774 TUBB1Q9H4B7 451 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 CD320Q9NPF0 282 aa13.27□□□□□ -0.29
SRP54-201ENST00000216774 CATSPERZQ9NTU4 200 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms