RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CCNE2O96020 404 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CATP04040 527 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 HSPA7P48741 367 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 DAW1Q8N136 415 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PIK3C3Q8NEB9 887 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CSPG4P5Q96PW8 444 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 IDI2Q9BXS1 227 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 GSTK1Q9Y2Q3 226 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 KRT33AO76009 404 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PDE9AO76083 593 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 NADKO95544 446 aaPredicted RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 RPL17P18621 184 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 IFNGR2P38484 337 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 UGT2B15P54855 530 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PMF1Q6P1K2 205 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 C4orf32Q8N8J7 132 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MOSPD2Q8NHP6 518 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 DNAJC1Q96KC8 554 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 DUSP16Q9BY84 665 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 BHLHE41Q9C0J9 482 aaPredicted RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 VWA7Q9Y334 891 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC28A1O00337 649 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 TREHO43280 583 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 LMO2P25791 158 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 IL12AP29459 219 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 GRM3Q14832 879 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 RNASEH2BQ5TBB1 312 aaKnown RBP13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 APLFQ8IW19 511 aaPredicted RBP13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 RAVER1Q8IY67 606 aaKnown RBP13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 ACSS3Q9H6R3 686 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 ASAH2Q9NR71 780 aa13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.23
TGFBR3-201ENST00000212355 C15orf38-AP3S2A0A0A6YYH1 394 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PCP4L1A6NKN8 68 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 NDUFS2O75306 463 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 AP2A2O94973 939 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PSMA3P25788 255 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 CBX3Q13185 183 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 NOMO1Q15155 1222 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GET4Q7L5D6 327 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ARPINQ7Z6K5 226 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC9A9Q8IVB4 645 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 MPP5Q8N3R9 675 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PTCD3Q96EY7 689 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TRNT1Q96Q11 434 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 C2orf49Q9BVC5 232 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 S100A14Q9HCY8 104 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 CFAP97Q9P2B7 532 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TNPO3Q9Y5L0 923 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 FAM92AA1XBS5 289 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PTNP21246 168 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC26A3P40879 764 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC20A2Q08357 652 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GPR180Q86V85 440 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 STK40Q8N2I9 435 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TWIST2Q8WVJ9 160 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 RNF31Q96EP0 1072 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF354BQ96LW1 612 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 INPP4AQ96PE3 977 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TMEM216Q9P0N5 145 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PCDHGC4Q9Y5F7 938 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 CYP3A7-CYP3A51PA0A087WV96 503 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 LRRC14BA6NHZ5 514 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 AREL1O15033 823 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 COL6A1P12109 1028 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 CYP3A7P24462 503 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TAF10Q12962 218 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 OLIG2Q13516 323 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 OLFML1Q6UWY5 402 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 FAM220AQ7Z4H9 259 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 EXOSC8Q96B26 276 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 TCF12Q99081 682 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GPR21Q99679 349 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF670Q9BS34 389 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 BRINP2Q9C0B6 783 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC6A2P23975 617 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ITPKBP27987 946 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 IL18Q14116 193 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 GALNTL5Q7Z4T8 443 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 CPT1BQ92523 772 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 DLG3Q92796 817 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 VAT1Q99536 393 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ERGIC3Q9Y282 383 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 PLLPQ9Y342 182 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 ZFP37Q9Y6Q3 630 aaPredicted RBP13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 FRMPD1Q5SYB0 1578 aa13.58□□□□□ -0.24
TGFBR3-201ENST00000212355 FPGTO14772 594 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms