RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TNS2Q63HR2 1409 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 C12orf71A8MTZ7 269 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 A8MV72 311 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 AZIN1O14977 448 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 DARSP14868 501 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 FMO4P31512 558 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 WDR4P57081 412 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 DCDC1P59894 354 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 FKBP1CQ5VVH2 108 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 HGSNATQ68CP4 663 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 CDCA2Q69YH5 1023 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 CLYBLQ8N0X4 340 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZCCHC2Q9C0B9 1178 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 ABHD16BQ9H3Z7 469 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 AASDHPPTQ9NRN7 309 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TMLHEQ9NVH6 421 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 UXTQ9UBK9 157 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 TRAF6Q9Y4K3 522 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 IRAK3Q9Y616 596 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 MEGF6O75095 1541 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TCRBV5S4A2TA0A5A2 114 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZNF286BP0CG31 522 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 GRK4P32298 578 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 RARRES1P49788 294 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TBX4P57082 545 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 SMCO1Q147U7 214 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 GPR65Q8IYL9 337 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 PHC3Q8NDX5 983 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 WDR48Q8TAF3 677 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 SPATA20Q8TB22 786 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 STAG3L4Q8TBR4 150 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 SLC38A2Q96QD8 506 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 MND1Q9BWT6 205 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 IDI2Q9BXS1 227 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ELOVL4Q9GZR5 314 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 MUC13Q9H3R2 512 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 FKBP14Q9NWM8 211 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 THG1LQ9NWX6 298 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 SNTG2Q9NY99 539 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 HSPB11Q9Y547 144 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 A0A0X1KG70 313 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 UBXN8O00124 270 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 CBX4O00257 560 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ACKR2O00590 384 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 VEGFAP15692 232 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 CD36P16671 472 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 CKMT2P17540 419 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 STT3AP46977 705 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 GPR15P49685 360 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 FMO1Q01740 532 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 PPP3CAQ08209 521 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 MFSD10Q14728 455 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 WSCD2Q2TBF2 565 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 KLHL35Q6PF15 583 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZNF572Q7Z3I7 529 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 CUZD1Q86UP6 607 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TDRPQ86YL5 185 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 PHACTR4Q8IZ21 702 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZNF557Q8N988 423 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 SMG8Q8ND04 991 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 POP5Q969H6 163 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 SLC6A15Q9H2J7 730 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 SETD4Q9NVD3 440 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TSPAN16Q9UKR8 245 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 TEX28O15482 410 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 MICAL2O94851 1124 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 OXSR1O95747 527 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 PTGIRP43119 386 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 PIK3CGP48736 1102 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 LIPEQ05469 1076 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 BRSK2Q8IWQ3 736 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZC3H7AQ8IWR0 971 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 PJA1Q8NG27 643 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ING5Q8WYH8 240 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 ZFP14Q9HCL3 533 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 CD320Q9NPF0 282 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 AHSPQ9NZD4 102 aa10.43□□□□□ -0.74
VCL-201ENST00000211998 IFT80Q9P2H3 777 aaPredicted RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 CNOT6Q9ULM6 557 aaKnown RBP10.43□□□□□ -0.74
VCL-201ENST00000211998 IQCMA0A1B0GVH7 501 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 K7EPI3 171 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 RAMP2O60895 175 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 HOXB8P17481 243 aaPredicted RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 CYP2A7P20853 494 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 HPCAL1P37235 193 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 OMPP47874 163 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 YWHAZP63104 245 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 RPL38P63173 70 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 LSM12Q3MHD2 195 aaKnown RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 VPS26BQ4G0F5 336 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 IFNLR1Q8IU57 520 aaPredicted RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 ANKRD52Q8NB46 1076 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 ISOC1Q96CN7 298 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 STOX2Q9P2F5 926 aaPredicted RBP10.42□□□□□ -0.74
VCL-201ENST00000211998 OPTCQ9UBM4 332 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 EDARQ9UNE0 448 aa10.42□□□□□ -0.74
VCL-201ENST00000211998 CASTOR2A6NHX0 329 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms